Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AL035666.1-201ENST00000446195 348 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 RPL23AP35-201ENST00000451906 501 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC013267.1-201ENST00000458227 267 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC145146.1-201ENST00000496370 254 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 HMGN1P13-201ENST00000505795 138 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC58Q4VC31 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 RNU6-885P-201ENST00000516607 104 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 SNORA31.16-201ENST00000516773 139 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC015712.3-201ENST00000559380 164 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC112220.3-201ENST00000605502 502 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 BX284668.6-201ENST00000606899 438 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC010133.1-201ENST00000615809 842 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AC080188.3-201ENST00000624842 748 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 U6.101-201ENST00000637707 76 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC58Q4VC31 RNU2-28P-201ENST00000410457 189 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 AL022400.1-201ENST00000423946 935 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 AC010153.1-201ENST00000432862 727 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 RAD1P2-201ENST00000446414 663 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC58Q4VC31 COX6CP14-201ENST00000469580 174 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC58Q4VC31 RPL26P26-201ENST00000480251 434 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 MTCYBP43-201ENST00000513621 740 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 ACA59.2-201ENST00000517061 156 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 AP003392.2-201ENST00000527269 208 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC58Q4VC31 VN1R80P-201ENST00000597126 338 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 RNU6-91P-201ENST00000607774 107 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC58Q4VC31 AL596245.1-201ENST00000618994 362 ntBASIC0.67□□□□□ -2.3
CCDC58Q4VC31 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 TRIM60P13-201ENST00000432350 1283 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 RN7SKP219-201ENST00000516825 296 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC022387.2-201ENST00000604050 448 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AC080078.3-201ENST00000605407 463 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
CCDC58Q4VC31 SNORA4.1-201ENST00000364263 144 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 RNU6-53P-201ENST00000365367 106 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 RNU6-546P-201ENST00000383991 107 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 SNORA25-201ENST00000384384 134 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 MRPL35P1-201ENST00000404272 572 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC092634.6-201ENST00000418558 192 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 VN1R10P-201ENST00000447106 875 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 SNRPFP4-201ENST00000456366 242 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC58Q4VC31 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC58Q4VC31 NIFKP8-201ENST00000560500 874 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.65□□□□□ -2.31
CCDC58Q4VC31 Z82243.1-201ENST00000609432 473 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC002550.2-201ENST00000621246 394 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AC099063.3-201ENST00000642066 185 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 MTND5P11-201ENST00000511037 1812 ntBASIC0.65□□□□□ -2.31
CCDC58Q4VC31 AL133475.1-201ENST00000404414 305 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 MTATP6P27-201ENST00000416987 621 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 UBE2V1P8-201ENST00000437166 265 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 RPL30P1-201ENST00000488676 339 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 ARL2BPP4-201ENST00000506854 471 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC58Q4VC31 TRAV32-201ENST00000553993 340 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC093249.1-201ENST00000567049 203 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 MIR4698-201ENST00000577795 80 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC098848.2-201ENST00000588023 330 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 AC021171.1-201ENST00000603137 706 ntBASIC0.64□□□□□ -2.31
CCDC58Q4VC31 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 Y_RNA.99-201ENST00000363138 105 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 RNU6-23P-201ENST00000363283 107 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 RNU6-1080P-201ENST00000383982 107 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 RNU6-1065P-201ENST00000384513 106 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC119751.3-201ENST00000399720 670 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 CYCSP33-201ENST00000414485 327 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 OR2AQ1P-201ENST00000451972 200 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC013828.1-201ENST00000481845 158 ntBASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC58Q4VC31 AC008628.1-201ENST00000508663 265 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms