Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 ZNF90P2-204ENST00000419323 1075 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 MTND6P13-201ENST00000443510 523 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AL118520.1-201ENST00000450770 291 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 FABP5P15-201ENST00000453566 214 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 RPL21P99-201ENST00000480369 423 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 RPS27AP10-201ENST00000496103 208 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AC116337.1-201ENST00000509680 687 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 RNU7-51P-201ENST00000516560 62 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 Y_RNA.689-201ENST00000516589 107 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AC011979.2-201ENST00000527568 352 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AL158032.1-201ENST00000605401 106 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 RNU6-297P-201ENST00000384636 107 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AL591212.2-201ENST00000433923 257 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 PGBD4P3-201ENST00000440731 581 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC016691.1-201ENST00000441321 413 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SNORD19.2-201ENST00000516978 73 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 OR5B19P-201ENST00000531766 928 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 BNIP3P9-201ENST00000603714 553 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SNRPGP19-201ENST00000603826 189 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SEPT7P9-203ENST00000604116 343 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 FRG1KP-201ENST00000623592 341 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AL512643.1-201ENST00000635735 524 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 AC110491.1-201ENST00000562191 2010 ntBASIC2.51□□□□□ -2.01
SHROOM1Q2M3G4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 SNORA4.3-201ENST00000365564 137 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 SNORA20.2-201ENST00000383922 131 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 RPL23AP32-201ENST00000395315 459 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 RN7SKP142-201ENST00000411236 328 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 CYCSP49-201ENST00000420810 319 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 EIF4EP4-201ENST00000424916 578 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 ISCA1P1-201ENST00000426679 387 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 RPL39P36-201ENST00000490784 156 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 HMGB3P3-201ENST00000510526 400 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC010486.3-201ENST00000511602 785 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 SCARNA3-201ENST00000517097 143 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC022616.3-201ENST00000523940 148 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 RPS3AP4-201ENST00000555161 764 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AL359212.1-201ENST00000556608 614 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 LRRC37A5P-203ENST00000580181 585 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC073544.2-201ENST00000601155 540 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 Z94722.1-201ENST00000604328 474 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 AC010678.1-201ENST00000614118 713 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 MIR3974-201ENST00000637126 96 ntBASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHROOM1Q2M3G4 MTND4P35-201ENST00000604257 1375 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 RNU6-778P-201ENST00000363269 103 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 Y_RNA.201-201ENST00000364052 96 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 RNY3P9-201ENST00000384727 106 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 BX295541.1-201ENST00000417774 250 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 AL353729.1-201ENST00000425044 720 ntBASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.49□□□□□ -2.01
SHROOM1Q2M3G4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms