Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH1Q08174 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH1Q08174 MFSD8-216ENST00000641147 4009 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDH1Q08174 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH1Q08174 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH1Q08174 MARK2P15-201ENST00000432204 2186 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 RNU6-942P-201ENST00000363002 107 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 RNU6-898P-201ENST00000365627 104 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 RNU6-658P-201ENST00000384606 106 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 MIR192-201ENST00000384915 110 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 MIR659-201ENST00000384963 97 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 SNORD12B-201ENST00000410433 91 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 Y_RNA.626-201ENST00000411288 95 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AC092017.2-201ENST00000427600 362 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDH1Q08174 RPL23AP93-201ENST00000440847 484 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AC011753.3-201ENST00000443436 406 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 COX6CP14-201ENST00000469580 174 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AC100770.1-201ENST00000532310 322 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH1Q08174 MIR4330-201ENST00000579077 105 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH1Q08174 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDH1Q08174 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH1Q08174 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDH1Q08174 OR56B2P-202ENST00000641377 2453 ntBASIC4.32□□□□□ -1.72
PCDH1Q08174 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDH1Q08174 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH1Q08174 FTLP6-201ENST00000355274 422 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNA5SP361-201ENST00000362686 118 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNA5SP502-201ENST00000362694 119 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNU6-682P-201ENST00000363843 106 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 SNORA7.2-201ENST00000364446 145 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 Y_RNA.286-201ENST00000364813 102 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNY4P28-201ENST00000365281 93 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 MIR3065-201ENST00000390137 79 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RPS16P5-201ENST00000406501 404 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNU5A-5P-201ENST00000411054 116 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AL590139.1-201ENST00000416267 400 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 COX6CP10-201ENST00000416832 224 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH1Q08174 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH1Q08174 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH1Q08174 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH1Q08174 MTATP6P7-201ENST00000453315 681 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC010469.1-201ENST00000463864 576 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 BTF3L4P4-201ENST00000506381 449 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC091874.1-201ENST00000511402 339 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH1Q08174 AC015795.1-201ENST00000513669 327 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNA5SP497-201ENST00000516081 97 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RNU1-103P-201ENST00000516502 125 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC090281.1-201ENST00000523019 276 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AP006289.1-201ENST00000538089 277 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 H3F3AP1-201ENST00000559984 334 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AL162424.1-201ENST00000602325 221 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 AC015813.4-201ENST00000610469 179 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RN7SL722P-201ENST00000617780 284 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 RN7SL565P-201ENST00000618246 284 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH1Q08174 AC068254.2-201ENST00000623938 3577 ntBASIC4.31□□□□□ -1.72
PCDH1Q08174 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH1Q08174 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH1Q08174 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH1Q08174 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU6-740P-201ENST00000364734 105 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 SNORA29-201ENST00000384183 140 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 Y_RNA.506-201ENST00000384494 102 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU6-125P-201ENST00000384505 107 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU6-541P-201ENST00000384709 110 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU6-1197P-201ENST00000391183 107 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU6-493P-201ENST00000391321 108 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 RNU4-30P-201ENST00000410245 143 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH1Q08174 AC016397.1-201ENST00000412463 242 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 FAR2P2-201ENST00000413041 594 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AC068287.1-201ENST00000430283 295 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH1Q08174 AC098831.1-201ENST00000440661 216 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AC096638.1-201ENST00000444678 216 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AC073264.2-201ENST00000448886 166 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 SSXP4-201ENST00000451349 245 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDH1Q08174 AC093840.1-201ENST00000511599 336 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 Y_RNA.683-201ENST00000516508 93 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AK6P2-201ENST00000549020 471 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH1Q08174 FTX_3.1-201ENST00000610451 147 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDH1Q08174 AC024581.2-201ENST00000619986 252 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
PCDH1Q08174 U2.21-201ENST00000637295 81 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms