Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RN7SL429P-201ENST00000479090 223 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RN7SL489P-201ENST00000486185 223 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RPS27P21-201ENST00000486977 252 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RN7SL327P-201ENST00000488659 223 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC007182.2-201ENST00000489251 402 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 RNU7-51P-201ENST00000516560 62 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RNU6-914P-201ENST00000516749 109 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RNU6-677P-201ENST00000516914 101 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RNU6-1183P-201ENST00000517054 60 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC025755.1-201ENST00000521306 278 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC012414.6-201ENST00000568241 401 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 AC008121.1-201ENST00000603244 268 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AL021997.1-201ENST00000605757 193 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 MIR15A-201ENST00000607334 83 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 RN7SL853P-201ENST00000617250 223 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 AL603839.4-201ENST00000624658 1005 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 PISRT1-201ENST00000626175 531 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 U6.99-201ENST00000637524 83 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HMGCS1Q01581 ADAM3A-203ENST00000461344 2157 ntBASIC1.95□□□□□ -2.1
HMGCS1Q01581 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGCS1Q01581 U8.3-201ENST00000363321 132 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGCS1Q01581 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 RPL23AP32-201ENST00000395315 459 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 SNORA11.2-201ENST00000408318 127 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 MTND2P18-201ENST00000419962 1030 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 ELOCP4-201ENST00000420090 333 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC092447.3-201ENST00000426027 686 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 RPL23AP30-201ENST00000432419 501 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 MICF-203ENST00000432679 129 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 KLF3P2-201ENST00000465138 268 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC109927.2-201ENST00000506416 303 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 RNU1-41P-201ENST00000516161 162 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 RNU6-581P-201ENST00000516214 105 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 RNU1-48P-201ENST00000516400 162 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 RNU6-572P-201ENST00000516724 80 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 SCARNA3-201ENST00000517097 143 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC022616.3-201ENST00000523940 148 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 AL121821.2-201ENST00000556081 394 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC005771.1-201ENST00000585581 349 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 BNIP3P8-201ENST00000597863 560 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AL355598.1-201ENST00000604169 202 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AL451064.1-201ENST00000607718 471 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 AC011939.3-201ENST00000613686 466 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 MIR7157-201ENST00000635801 60 ntBASIC1.94□□□□□ -2.1
HMGCS1Q01581 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HMGCS1Q01581 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS1Q01581 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGCS1Q01581 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 RNY4P34-201ENST00000364779 95 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 RNU6-195P-201ENST00000411352 109 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 RPS3AP3-201ENST00000411933 242 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC137499.1-201ENST00000427602 88 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL161651.1-201ENST00000440882 223 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL022238.1-201ENST00000442557 355 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 BRK1P2-201ENST00000442875 223 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 FABP5P13-201ENST00000452144 328 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 MTCO2P29-201ENST00000465212 189 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC098862.1-201ENST00000504991 413 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 RNU6-1315P-201ENST00000517187 99 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC007151.1-201ENST00000572774 483 ntBASIC1.93□□□□□ -2.1
HMGCS1Q01581 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms