Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNA5SP130-201ENST00000364431 114 ntBASIC3.99□□□□□ -1.77
YBX1P67809 SNORA70.4-201ENST00000365509 134 ntBASIC3.99□□□□□ -1.77
YBX1P67809 Y_RNA.405-201ENST00000383979 100 ntBASIC3.99□□□□□ -1.77
YBX1P67809 Y_RNA.451-201ENST00000384200 100 ntBASIC3.99□□□□□ -1.77
YBX1P67809 Y_RNA.464-201ENST00000384282 110 ntBASIC3.99□□□□□ -1.77
YBX1P67809 Y_RNA.524-201ENST00000384564 100 ntBASIC3.99□□□□□ -1.77
YBX1P67809 Y_RNA.561-201ENST00000384694 100 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPS26P8-201ENST00000393490 348 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL21P75-201ENST00000396599 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL21P28-201ENST00000401418 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPS29P13-201ENST00000402041 169 ntBASIC3.99□□□□□ -1.77
YBX1P67809 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AL592148.1-201ENST00000413568 445 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.99□□□□□ -1.77
YBX1P67809 AL590556.1-201ENST00000423231 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 TMEM167AP1-201ENST00000423409 219 ntBASIC3.99□□□□□ -1.77
YBX1P67809 TOMM20P4-201ENST00000427861 435 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC011742.1-201ENST00000431448 434 ntBASIC3.99□□□□□ -1.77
YBX1P67809 OR4C10P-201ENST00000434991 931 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL23AP22-201ENST00000437556 453 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL21P11-201ENST00000461458 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL21P39-201ENST00000463605 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC132942.1-201ENST00000486753 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC093591.1-201ENST00000491435 481 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RPL21P16-201ENST00000495531 483 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
YBX1P67809 RNU6-612P-201ENST00000516909 102 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.99□□□□□ -1.77
YBX1P67809 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.99□□□□□ -1.77
YBX1P67809 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.99□□□□□ -1.77
YBX1P67809 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AC006130.2-201ENST00000586202 326 ntBASIC3.99□□□□□ -1.77
YBX1P67809 AL161798.1-201ENST00000604630 131 ntBASIC3.99□□□□□ -1.77
YBX1P67809 MIR6867-201ENST00000610636 67 ntBASIC3.99□□□□□ -1.77
YBX1P67809 MIR6075-201ENST00000620782 95 ntBASIC3.99□□□□□ -1.77
YBX1P67809 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.99□□□□□ -1.77
YBX1P67809 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
YBX1P67809 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.99□□□□□ -1.77
YBX1P67809 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
YBX1P67809 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
YBX1P67809 AL365440.1-201ENST00000436135 2167 ntBASIC3.99□□□□□ -1.77
YBX1P67809 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.98□□□□□ -1.77
YBX1P67809 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.98□□□□□ -1.77
YBX1P67809 U3.6-201ENST00000363622 211 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNU6-378P-201ENST00000384324 107 ntBASIC3.98□□□□□ -1.77
YBX1P67809 PCNPP3-201ENST00000393579 471 ntBASIC3.98□□□□□ -1.77
YBX1P67809 LAP3P1-201ENST00000403648 294 ntBASIC3.98□□□□□ -1.77
YBX1P67809 MIR1179-201ENST00000408703 91 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNA5SP317-201ENST00000410176 116 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNU2-20P-201ENST00000410425 191 ntBASIC3.98□□□□□ -1.77
YBX1P67809 Y_RNA.602-201ENST00000410535 92 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNA5SP311-201ENST00000411290 116 ntBASIC3.98□□□□□ -1.77
YBX1P67809 AL606753.1-201ENST00000427435 87 ntBASIC3.98□□□□□ -1.77
YBX1P67809 PIGFP3-201ENST00000441918 722 ntBASIC3.98□□□□□ -1.77
YBX1P67809 NDUFB4P10-201ENST00000452541 359 ntBASIC3.98□□□□□ -1.77
YBX1P67809 AL136097.1-201ENST00000456945 913 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNA5SP246-201ENST00000458909 119 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RPL31P61-201ENST00000496160 376 ntBASIC3.98□□□□□ -1.77
YBX1P67809 SERF1AP1-201ENST00000514575 187 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNA5SP315-201ENST00000516340 116 ntBASIC3.98□□□□□ -1.77
YBX1P67809 SNORA67.7-201ENST00000516664 135 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNU6-255P-201ENST00000516957 105 ntBASIC3.98□□□□□ -1.77
YBX1P67809 RNA5SP312-201ENST00000517068 116 ntBASIC3.98□□□□□ -1.77
YBX1P67809 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.98□□□□□ -1.77
YBX1P67809 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.98□□□□□ -1.77
YBX1P67809 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.98□□□□□ -1.77
YBX1P67809 AC004024.1-201ENST00000549244 247 ntBASIC3.98□□□□□ -1.77
YBX1P67809 MIR4444-1-201ENST00000581696 74 ntBASIC3.98□□□□□ -1.77
YBX1P67809 MIR4444-2-201ENST00000584390 74 ntBASIC3.98□□□□□ -1.77
YBX1P67809 AC008121.1-201ENST00000603244 268 ntBASIC3.98□□□□□ -1.77
YBX1P67809 AC073657.2-201ENST00000605661 303 ntBASIC3.98□□□□□ -1.77
YBX1P67809 Y_RNA.772-201ENST00000606692 102 ntBASIC3.98□□□□□ -1.77
YBX1P67809 AC006133.1-201ENST00000617106 264 ntBASIC3.98□□□□□ -1.77
YBX1P67809 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
YBX1P67809 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
YBX1P67809 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
YBX1P67809 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
YBX1P67809 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.97□□□□□ -1.77
YBX1P67809 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.97□□□□□ -1.77
YBX1P67809 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
YBX1P67809 MIR372-201ENST00000362225 67 ntBASIC3.97□□□□□ -1.77
YBX1P67809 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
YBX1P67809 Y_RNA.541-201ENST00000384640 113 ntBASIC3.97□□□□□ -1.77
YBX1P67809 MIR670-201ENST00000390142 98 ntBASIC3.97□□□□□ -1.77
YBX1P67809 SNORA12.2-201ENST00000391040 156 ntBASIC3.97□□□□□ -1.77
YBX1P67809 MIR548I2-201ENST00000408348 149 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AL117339.3-201ENST00000418733 162 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AL358472.1-201ENST00000431295 329 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AL445305.1-201ENST00000432577 575 ntBASIC3.97□□□□□ -1.77
YBX1P67809 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
YBX1P67809 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
YBX1P67809 AL358232.1-201ENST00000448030 501 ntBASIC3.97□□□□□ -1.77
YBX1P67809 RPS23P5-201ENST00000495419 428 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.97□□□□□ -1.77
YBX1P67809 Y_RNA.703-201ENST00000516846 111 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AC084851.1-201ENST00000529105 249 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.97□□□□□ -1.77
YBX1P67809 MIR3158-1-201ENST00000583596 81 ntBASIC3.97□□□□□ -1.77
YBX1P67809 AC010620.2-201ENST00000600135 313 ntBASIC3.97□□□□□ -1.77
YBX1P67809 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms