Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ACTBP60709 RNU6-462P-201ENST00000362659 105 ntBASIC1.39□□□□□ -2.19
ACTBP60709 RNU6-1280P-201ENST00000365211 107 ntBASIC1.39□□□□□ -2.19
ACTBP60709 RNU6-817P-201ENST00000391083 104 ntBASIC1.39□□□□□ -2.19
ACTBP60709 RN7SKP101-201ENST00000411376 320 ntBASIC1.39□□□□□ -2.19
ACTBP60709 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.39□□□□□ -2.19
ACTBP60709 TXNL1P1-201ENST00000429528 554 ntBASIC1.39□□□□□ -2.19
ACTBP60709 HMGB1P27-201ENST00000431429 603 ntBASIC1.39□□□□□ -2.19
ACTBP60709 USP9YP24-201ENST00000434374 697 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AL360221.1-201ENST00000445989 335 ntBASIC1.39□□□□□ -2.19
ACTBP60709 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AC006512.1-201ENST00000468816 291 ntBASIC1.39□□□□□ -2.19
ACTBP60709 RPL39P36-201ENST00000490784 156 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AC104629.1-201ENST00000494226 508 ntBASIC1.39□□□□□ -2.19
ACTBP60709 MTND4P2-201ENST00000507767 1203 ntBASIC1.39□□□□□ -2.19
ACTBP60709 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
ACTBP60709 RNU6-467P-201ENST00000517027 110 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AC010376.1-201ENST00000522101 334 ntBASIC1.39□□□□□ -2.19
ACTBP60709 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.39□□□□□ -2.19
ACTBP60709 OR5B19P-201ENST00000531766 928 ntBASIC1.39□□□□□ -2.19
ACTBP60709 IMMP1LP2-201ENST00000552954 492 ntBASIC1.39□□□□□ -2.19
ACTBP60709 MIR4782-201ENST00000577987 79 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AL670379.10-201ENST00000604330 253 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AL670379.9-201ENST00000605428 253 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AC090970.3-201ENST00000612566 866 ntBASIC1.39□□□□□ -2.19
ACTBP60709 MIR6845-201ENST00000613182 61 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AC006386.1-201ENST00000619436 415 ntBASIC1.39□□□□□ -2.19
ACTBP60709 AL136313.1-201ENST00000624804 202 ntBASIC1.39□□□□□ -2.19
ACTBP60709 U6.99-201ENST00000637524 83 ntBASIC1.39□□□□□ -2.19
ACTBP60709 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.39□□□□□ -2.19
ACTBP60709 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.39□□□□□ -2.19
ACTBP60709 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ACTBP60709 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
ACTBP60709 AC138393.1-203ENST00000327086 343 ntBASIC1.38□□□□□ -2.19
ACTBP60709 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
ACTBP60709 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
ACTBP60709 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ACTBP60709 MIR320C1-201ENST00000408566 88 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC069282.1-201ENST00000411911 526 ntBASIC1.38□□□□□ -2.19
ACTBP60709 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ACTBP60709 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.38□□□□□ -2.19
ACTBP60709 AL592045.1-201ENST00000429867 352 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.38□□□□□ -2.19
ACTBP60709 FCF1P6-201ENST00000456841 595 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC108729.1-201ENST00000487812 947 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.38□□□□□ -2.19
ACTBP60709 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.38□□□□□ -2.19
ACTBP60709 DEFB108A-201ENST00000530110 222 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AK6P1-201ENST00000540219 478 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.38□□□□□ -2.19
ACTBP60709 AC136619.2-201ENST00000563361 631 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 ELOCP5-201ENST00000604924 333 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC107952.2-201ENST00000606048 486 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.38□□□□□ -2.19
ACTBP60709 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
ACTBP60709 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.38□□□□□ -2.19
ACTBP60709 ZNF876P-202ENST00000398732 1485 ntBASIC1.37□□□□□ -2.19
ACTBP60709 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ACTBP60709 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.37□□□□□ -2.19
ACTBP60709 RNU5A-8P-201ENST00000364102 114 ntBASIC1.37□□□□□ -2.19
ACTBP60709 RNU6-898P-201ENST00000365627 104 ntBASIC1.37□□□□□ -2.19
ACTBP60709 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
ACTBP60709 MIR764-201ENST00000390811 85 ntBASIC1.37□□□□□ -2.19
ACTBP60709 SNORA40C-201ENST00000391285 128 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AC068050.1-201ENST00000394891 380 ntBASIC1.37□□□□□ -2.19
ACTBP60709 MIR1283-2-201ENST00000408621 87 ntBASIC1.37□□□□□ -2.19
ACTBP60709 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AC019070.1-201ENST00000415008 1024 ntBASIC1.37□□□□□ -2.19
ACTBP60709 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ACTBP60709 AC083875.1-201ENST00000419509 405 ntBASIC1.37□□□□□ -2.19
ACTBP60709 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.37□□□□□ -2.19
ACTBP60709 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.37□□□□□ -2.19
ACTBP60709 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.37□□□□□ -2.19
ACTBP60709 AC118469.1-201ENST00000442943 488 ntBASIC1.37□□□□□ -2.19
ACTBP60709 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.37□□□□□ -2.19
ACTBP60709 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.37□□□□□ -2.19
ACTBP60709 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
ACTBP60709 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.37□□□□□ -2.19
ACTBP60709 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.37□□□□□ -2.19
ACTBP60709 RNU6-572P-201ENST00000516724 80 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AC015712.3-201ENST00000559380 164 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AL356432.3-201ENST00000568952 465 ntBASIC1.37□□□□□ -2.19
ACTBP60709 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.37□□□□□ -2.19
ACTBP60709 AC025811.1-201ENST00000604312 472 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AC107308.1-201ENST00000615897 301 ntBASIC1.37□□□□□ -2.19
ACTBP60709 AL359314.1-201ENST00000616913 261 ntBASIC1.37□□□□□ -2.19
ACTBP60709 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.37□□□□□ -2.19
ACTBP60709 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.37□□□□□ -2.19
ACTBP60709 RBBP8P1-201ENST00000449447 1844 ntBASIC1.36□□□□□ -2.19
ACTBP60709 Y_RNA.192-201ENST00000363977 102 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNU1-57P-201ENST00000384491 166 ntBASIC1.36□□□□□ -2.19
ACTBP60709 Y_RNA.534-201ENST00000384599 112 ntBASIC1.36□□□□□ -2.19
ACTBP60709 RNU6-482P-201ENST00000391068 107 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms