Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.5□□□□□ -2.01
PEX3P56589 RPL36AP53-201ENST00000432891 316 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.5□□□□□ -2.01
PEX3P56589 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 WASF1P1-201ENST00000447560 1131 ntBASIC2.5□□□□□ -2.01
PEX3P56589 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.5□□□□□ -2.01
PEX3P56589 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.5□□□□□ -2.01
PEX3P56589 AC093899.1-201ENST00000457984 376 ntBASIC2.5□□□□□ -2.01
PEX3P56589 RPS29P20-201ENST00000489592 171 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC139453.3-201ENST00000493276 369 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.5□□□□□ -2.01
PEX3P56589 AC091435.1-201ENST00000505442 584 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC114786.4-201ENST00000508771 728 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC008549.1-201ENST00000512900 643 ntBASIC2.5□□□□□ -2.01
PEX3P56589 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.5□□□□□ -2.01
PEX3P56589 RNU6-123P-201ENST00000516163 102 ntBASIC2.5□□□□□ -2.01
PEX3P56589 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.5□□□□□ -2.01
PEX3P56589 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.5□□□□□ -2.01
PEX3P56589 AC091544.4-201ENST00000555268 342 ntBASIC2.5□□□□□ -2.01
PEX3P56589 SUB1P2-201ENST00000556401 297 ntBASIC2.5□□□□□ -2.01
PEX3P56589 MIR4775-201ENST00000581168 75 ntBASIC2.5□□□□□ -2.01
PEX3P56589 BNIP3P9-201ENST00000603714 553 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC025449.1-201ENST00000603896 529 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AP001596.2-201ENST00000608410 312 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC087241.4-201ENST00000612441 480 ntBASIC2.5□□□□□ -2.01
PEX3P56589 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.5□□□□□ -2.01
PEX3P56589 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AL160394.1-201ENST00000624765 724 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
PEX3P56589 AC008669.1-201ENST00000565823 2178 ntBASIC2.5□□□□□ -2.01
PEX3P56589 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PEX3P56589 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PEX3P56589 RNU6-179P-201ENST00000363350 107 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
PEX3P56589 SNORD115-7-201ENST00000365306 82 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU1-73P-201ENST00000383971 164 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU5A-6P-201ENST00000384136 116 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU6-456P-201ENST00000384493 107 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU6-606P-201ENST00000384721 111 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RNU6-387P-201ENST00000411331 105 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AC007064.1-201ENST00000412238 351 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.49□□□□□ -2.01
PEX3P56589 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.49□□□□□ -2.01
PEX3P56589 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.49□□□□□ -2.01
PEX3P56589 BPY2DP-201ENST00000422208 265 ntBASIC2.49□□□□□ -2.01
PEX3P56589 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
PEX3P56589 MTND4P25-201ENST00000441039 533 ntBASIC2.49□□□□□ -2.01
PEX3P56589 RBBP4P6-201ENST00000508098 202 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 Y_RNA.655-201ENST00000515919 96 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AC026241.1-201ENST00000517873 2142 ntBASIC2.49□□□□□ -2.01
PEX3P56589 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PEX3P56589 AP002770.2-201ENST00000543613 532 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AC009163.5-201ENST00000575421 637 ntBASIC2.49□□□□□ -2.01
PEX3P56589 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.49□□□□□ -2.01
PEX3P56589 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
PEX3P56589 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AL359547.2-201ENST00000615810 418 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 AC011155.2-201ENST00000623202 216 ntBASIC2.49□□□□□ -2.01
PEX3P56589 AL157786.1-207ENST00000627771 695 ntBASIC2.49□□□□□ -2.01
PEX3P56589 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
PEX3P56589 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.49□□□□□ -2.01
PEX3P56589 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PEX3P56589 AL139276.1-201ENST00000311910 1001 ntBASIC2.48□□□□□ -2.01
PEX3P56589 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PEX3P56589 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.48□□□□□ -2.01
PEX3P56589 RNU4-48P-201ENST00000365559 182 ntBASIC2.48□□□□□ -2.01
PEX3P56589 Z98749.2-208ENST00000381646 500 ntBASIC2.48□□□□□ -2.01
PEX3P56589 Y_RNA.576-201ENST00000384781 102 ntBASIC2.48□□□□□ -2.01
PEX3P56589 MIR221-201ENST00000385135 110 ntBASIC2.48□□□□□ -2.01
PEX3P56589 SNORA3.2-201ENST00000408221 125 ntBASIC2.48□□□□□ -2.01
PEX3P56589 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.48□□□□□ -2.01
PEX3P56589 NDUFS5P4-201ENST00000412983 318 ntBASIC2.48□□□□□ -2.01
PEX3P56589 MTATP6P18-201ENST00000417994 673 ntBASIC2.48□□□□□ -2.01
PEX3P56589 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.48□□□□□ -2.01
PEX3P56589 AL353193.1-201ENST00000421444 268 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AL451074.3-201ENST00000437709 472 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.48□□□□□ -2.01
PEX3P56589 BRK1P2-201ENST00000442875 223 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PEX3P56589 MTATP6P7-201ENST00000453315 681 ntBASIC2.48□□□□□ -2.01
PEX3P56589 RPS3AP17-201ENST00000472594 777 ntBASIC2.48□□□□□ -2.01
PEX3P56589 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.48□□□□□ -2.01
PEX3P56589 AC026801.1-201ENST00000497178 464 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.48□□□□□ -2.01
PEX3P56589 AC022634.1-201ENST00000520765 532 ntBASIC2.48□□□□□ -2.01
PEX3P56589 FAM92A1P1-201ENST00000528023 890 ntBASIC2.48□□□□□ -2.01
PEX3P56589 AL157871.3-201ENST00000557231 293 ntBASIC2.48□□□□□ -2.01
PEX3P56589 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.48□□□□□ -2.01
PEX3P56589 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.48□□□□□ -2.01
PEX3P56589 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms