Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 AC018462.2-201ENST00000605375 395 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 MIR6130-201ENST00000619419 109 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 PLCE1P1-201ENST00000622094 305 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.58□□□□□ -1.84
CACNA2D1P54289 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CACNA2D1P54289 AL137003.2-201ENST00000606924 2538 ntBASIC3.58□□□□□ -1.84
CACNA2D1P54289 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-288P-201ENST00000363690 104 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 Y_RNA.252-201ENST00000364556 101 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-805P-201ENST00000365643 106 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-128P-201ENST00000383976 107 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-190P-201ENST00000384154 102 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 Y_RNA.496-201ENST00000384444 101 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-14P-201ENST00000384630 106 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-95P-201ENST00000384697 107 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 HMGB3P2-201ENST00000411913 584 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 RPL21P66-201ENST00000426566 466 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC010285.1-201ENST00000470580 392 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 FCF1P8-201ENST00000510322 597 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU6-699P-201ENST00000517081 110 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 RNU1-54P-201ENST00000517181 120 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC126177.3-201ENST00000551839 688 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 MTCO3P23-201ENST00000561363 289 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC004817.2-201ENST00000561794 651 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.57□□□□□ -1.84
CACNA2D1P54289 AL161756.2-201ENST00000604597 246 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.57□□□□□ -1.84
CACNA2D1P54289 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 Y_RNA.47-201ENST00000362697 108 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 RNU6-1155P-201ENST00000363554 107 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 SNORA75.6-201ENST00000391318 127 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 RNU6-712P-201ENST00000410558 100 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 RNA5SP120-201ENST00000410900 112 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC063979.1-201ENST00000415539 377 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 RPL23AP69-201ENST00000431134 458 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC090774.1-201ENST00000435925 246 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 AL357552.1-201ENST00000445254 415 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 Z75741.1-201ENST00000446793 314 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 GSTA11P-201ENST00000452866 669 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 RPL31P13-201ENST00000484151 370 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 HMGB1P30-201ENST00000492455 606 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC009901.1-201ENST00000506703 541 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 SNORA31.20-201ENST00000517111 133 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 AL121603.1-201ENST00000553815 142 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC104763.2-201ENST00000604179 382 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AL359547.2-201ENST00000615810 418 ntBASIC3.56□□□□□ -1.84
CACNA2D1P54289 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.56□□□□□ -1.84
CACNA2D1P54289 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CACNA2D1P54289 USP8P1-201ENST00000494673 3183 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA2D1P54289 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA2D1P54289 AC138393.1-203ENST00000327086 343 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 Y_RNA.149-201ENST00000363558 117 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 RNU6-1303P-201ENST00000364841 107 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 RNU6-1318P-201ENST00000365389 103 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CACNA2D1P54289 PPP1R11P2-201ENST00000423543 382 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.55□□□□□ -1.84
CACNA2D1P54289 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA2D1P54289 USP9YP30-201ENST00000430729 455 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 RN7SL601P-201ENST00000471221 293 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.55□□□□□ -1.84
CACNA2D1P54289 RNU6-470P-201ENST00000515954 104 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 RNA5SP384-201ENST00000516615 116 ntBASIC3.55□□□□□ -1.84
CACNA2D1P54289 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms