Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNU6-1227P-201ENST00000383981 107 ntBASIC3.42□□□□□ -1.86
COPB1P53618 Y_RNA.431-201ENST00000384086 102 ntBASIC3.42□□□□□ -1.86
COPB1P53618 MIR578-201ENST00000384828 96 ntBASIC3.42□□□□□ -1.86
COPB1P53618 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
COPB1P53618 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COPB1P53618 MIR450B-201ENST00000401182 78 ntBASIC3.42□□□□□ -1.86
COPB1P53618 MIR548F5-201ENST00000408421 86 ntBASIC3.42□□□□□ -1.86
COPB1P53618 RN7SKP158-201ENST00000410453 326 ntBASIC3.42□□□□□ -1.86
COPB1P53618 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COPB1P53618 AF228730.4-201ENST00000421457 183 ntBASIC3.42□□□□□ -1.86
COPB1P53618 AL592045.1-201ENST00000429867 352 ntBASIC3.42□□□□□ -1.86
COPB1P53618 AC097713.2-201ENST00000430199 356 ntBASIC3.42□□□□□ -1.86
COPB1P53618 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.42□□□□□ -1.86
COPB1P53618 RPL32P28-201ENST00000443577 397 ntBASIC3.42□□□□□ -1.86
COPB1P53618 MTND5P5-201ENST00000503764 376 ntBASIC3.42□□□□□ -1.86
COPB1P53618 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.42□□□□□ -1.86
COPB1P53618 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.42□□□□□ -1.86
COPB1P53618 RNU6-273P-201ENST00000516937 96 ntBASIC3.42□□□□□ -1.86
COPB1P53618 COPS8P3-201ENST00000526024 482 ntBASIC3.42□□□□□ -1.86
COPB1P53618 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.42□□□□□ -1.86
COPB1P53618 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.42□□□□□ -1.86
COPB1P53618 AC002545.1-201ENST00000592511 181 ntBASIC3.42□□□□□ -1.86
COPB1P53618 AC005000.2-201ENST00000605468 310 ntBASIC3.42□□□□□ -1.86
COPB1P53618 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COPB1P53618 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
COPB1P53618 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COPB1P53618 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
COPB1P53618 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.42□□□□□ -1.86
COPB1P53618 AC116096.1-201ENST00000566804 2314 ntBASIC3.41□□□□□ -1.86
COPB1P53618 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
COPB1P53618 RNA5SP295-201ENST00000362655 121 ntBASIC3.41□□□□□ -1.86
COPB1P53618 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 SNORD116-11-201ENST00000383882 92 ntBASIC3.41□□□□□ -1.86
COPB1P53618 RPS4XP7-201ENST00000406274 780 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AP000567.1-201ENST00000406413 156 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AC096664.2-201ENST00000411843 406 ntBASIC3.41□□□□□ -1.86
COPB1P53618 RPL21P90-201ENST00000415692 466 ntBASIC3.41□□□□□ -1.86
COPB1P53618 RPL27AP8-201ENST00000424277 446 ntBASIC3.41□□□□□ -1.86
COPB1P53618 RPL21P66-201ENST00000426566 466 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.41□□□□□ -1.86
COPB1P53618 MTCYBP6-201ENST00000441810 138 ntBASIC3.41□□□□□ -1.86
COPB1P53618 MTND1P17-201ENST00000448961 204 ntBASIC3.41□□□□□ -1.86
COPB1P53618 BX510359.1-201ENST00000456973 237 ntBASIC3.41□□□□□ -1.86
COPB1P53618 VN1R17P-201ENST00000472048 1090 ntBASIC3.41□□□□□ -1.86
COPB1P53618 RN7SL20P-201ENST00000488827 297 ntBASIC3.41□□□□□ -1.86
COPB1P53618 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.41□□□□□ -1.86
COPB1P53618 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.41□□□□□ -1.86
COPB1P53618 RNU6-1256P-201ENST00000516539 103 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 CYCSP27-201ENST00000527643 293 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.41□□□□□ -1.86
COPB1P53618 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 FRG2DP-202ENST00000566967 323 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 APOOP1-201ENST00000604695 592 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AC107294.1-201ENST00000609524 467 ntBASIC3.41□□□□□ -1.86
COPB1P53618 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.41□□□□□ -1.86
COPB1P53618 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.41□□□□□ -1.86
COPB1P53618 Z99571.1-201ENST00000636677 394 ntBASIC3.41□□□□□ -1.86
COPB1P53618 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
COPB1P53618 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
COPB1P53618 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COPB1P53618 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
COPB1P53618 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
COPB1P53618 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
COPB1P53618 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
COPB1P53618 Y_RNA.111-201ENST00000363248 100 ntBASIC3.4□□□□□ -1.87
COPB1P53618 RNU6-1303P-201ENST00000364841 107 ntBASIC3.4□□□□□ -1.87
COPB1P53618 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.4□□□□□ -1.87
COPB1P53618 SNORD116-29-201ENST00000384516 83 ntBASIC3.4□□□□□ -1.87
COPB1P53618 MIR1290-201ENST00000408735 78 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AC074085.1-201ENST00000413598 418 ntBASIC3.4□□□□□ -1.87
COPB1P53618 SKA2P1-201ENST00000425592 390 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.4□□□□□ -1.87
COPB1P53618 RPL23AP69-201ENST00000431134 458 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.4□□□□□ -1.87
COPB1P53618 FABP5P14-201ENST00000437273 393 ntBASIC3.4□□□□□ -1.87
COPB1P53618 FABP5P15-201ENST00000453566 214 ntBASIC3.4□□□□□ -1.87
COPB1P53618 RPS29P2-201ENST00000479278 136 ntBASIC3.4□□□□□ -1.87
COPB1P53618 RN7SL283P-201ENST00000489055 303 ntBASIC3.4□□□□□ -1.87
COPB1P53618 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.4□□□□□ -1.87
COPB1P53618 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.4□□□□□ -1.87
COPB1P53618 AP005597.4-201ENST00000526762 229 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AP005639.2-201ENST00000527592 928 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
COPB1P53618 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AL359757.2-201ENST00000624309 274 ntBASIC3.4□□□□□ -1.87
COPB1P53618 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COPB1P53618 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.87
COPB1P53618 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COPB1P53618 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.4□□□□□ -1.87
COPB1P53618 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COPB1P53618 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms