Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC093536.2-201ENST00000565257 1406 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
APOBEC1P41238 RNU6-266P-201ENST00000364225 107 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 U3.12-201ENST00000364498 214 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 RNU6-384P-201ENST00000364900 104 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 MT-TL1-201ENST00000386347 75 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AL162578.1-201ENST00000406202 378 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 RAP1BP3-201ENST00000407180 549 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
APOBEC1P41238 CYCSP33-201ENST00000414485 327 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.79□□□□□ -1.96
APOBEC1P41238 RPL21P40-201ENST00000428586 483 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBEC1P41238 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC009969.1-201ENST00000438726 172 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC083904.1-201ENST00000487828 231 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 TBCAP3-201ENST00000512475 312 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 RPL7P20-201ENST00000520308 745 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC118273.2-201ENST00000532092 465 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC023050.3-201ENST00000541142 333 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AL451007.1-201ENST00000595491 289 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC002044.1-201ENST00000606707 158 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC099778.2-201ENST00000610904 211 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
APOBEC1P41238 AC093913.1-201ENST00000614178 329 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.79□□□□□ -1.96
APOBEC1P41238 DUXAP9-208ENST00000622815 614 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC090617.10-201ENST00000624308 134 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 SNORA50A-202ENST00000629536 136 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
APOBEC1P41238 MAPK10-322ENST00000641485 4530 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 AC110774.1-201ENST00000623567 2018 ntBASIC2.79□□□□□ -1.96
APOBEC1P41238 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
APOBEC1P41238 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
APOBEC1P41238 ADAM3A-203ENST00000461344 2157 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
APOBEC1P41238 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBEC1P41238 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.78□□□□□ -1.96
APOBEC1P41238 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.78□□□□□ -1.96
APOBEC1P41238 Y_RNA.72-201ENST00000362894 103 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 RNU1-105P-201ENST00000363470 161 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 Z98749.2-208ENST00000381646 500 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 PGBD4P6-201ENST00000421501 610 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBEC1P41238 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 HMGN2P10-201ENST00000448085 265 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 MTND3P10-201ENST00000450967 341 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AC104472.2-201ENST00000469035 601 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AP000852.1-201ENST00000472460 573 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 RN7SL504P-201ENST00000494496 287 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBEC1P41238 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.78□□□□□ -1.96
APOBEC1P41238 SNORA19.2-201ENST00000516013 114 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 SNORA25.17-201ENST00000517184 124 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AC022634.1-201ENST00000520765 532 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AP000763.2-201ENST00000540641 163 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 DNAJC8P1-201ENST00000554535 372 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 PSMA3P-201ENST00000555485 635 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.78□□□□□ -1.96
APOBEC1P41238 AC021739.1-201ENST00000559631 174 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 AL133393.1-201ENST00000603277 287 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 NUTF2P8-201ENST00000604593 363 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 MIR6134-201ENST00000617606 109 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.78□□□□□ -1.96
APOBEC1P41238 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
APOBEC1P41238 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
APOBEC1P41238 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
APOBEC1P41238 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.78□□□□□ -1.97
APOBEC1P41238 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.97
APOBEC1P41238 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.77□□□□□ -1.97
APOBEC1P41238 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBEC1P41238 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
APOBEC1P41238 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 Y_RNA.160-201ENST00000363677 92 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 Y_RNA.167-201ENST00000363735 109 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 SNORD46.1-201ENST00000364139 104 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 RNU6-898P-201ENST00000365627 104 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 Y_RNA.390-201ENST00000383932 102 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 SNORA46-201ENST00000384762 135 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 RPL21P3-201ENST00000395517 478 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 AC245054.2-201ENST00000415639 319 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.77□□□□□ -1.97
APOBEC1P41238 USP9YP20-201ENST00000419224 558 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 MTND4LP11-201ENST00000422184 280 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 AL513185.2-201ENST00000425543 193 ntBASIC2.77□□□□□ -1.97
APOBEC1P41238 AL365496.1-201ENST00000426885 215 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms