Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TRIM23P36406 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.02
TRIM23P36406 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TRIM23P36406 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TRIM23P36406 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM23P36406 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM23P36406 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 Y_RNA.33-201ENST00000362591 102 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 SNORA4.3-201ENST00000365564 137 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 RNU6-641P-201ENST00000384006 107 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 SNORA6-201ENST00000384033 151 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 SNORA40C-201ENST00000391285 128 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 MIR1302-8-201ENST00000408342 128 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM23P36406 MTCYBP5-201ENST00000423752 1135 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 ISCA1P6-201ENST00000427740 390 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM23P36406 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM23P36406 USP9YP29-201ENST00000445112 563 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 IFNA11P-201ENST00000446352 526 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC233279.1-201ENST00000455300 423 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC116562.3-201ENST00000506136 177 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC108078.2-201ENST00000510750 236 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 MTCO3P28-201ENST00000513351 515 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC117532.1-201ENST00000514638 323 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 RNU6-1183P-201ENST00000517054 60 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 MTCO2P4-201ENST00000517968 247 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC068587.5-201ENST00000528506 175 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC006199.1-201ENST00000548728 219 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC009127.3-201ENST00000570531 403 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 RPS3AP23-202ENST00000574601 686 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 PIGPP4-201ENST00000584447 307 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.4□□□□□ -2.03
TRIM23P36406 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.4□□□□□ -2.03
TRIM23P36406 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 MIR1291-201ENST00000627649 87 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 U6.99-201ENST00000637524 83 ntBASIC2.4□□□□□ -2.03
TRIM23P36406 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM23P36406 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.4□□□□□ -2.03
TRIM23P36406 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TRIM23P36406 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM23P36406 MTND4P27-201ENST00000450813 1354 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC080128.1-201ENST00000474389 1917 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 RNU6-179P-201ENST00000363350 107 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 Y_RNA.201-201ENST00000364052 96 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 RNU6-61P-201ENST00000365528 109 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 SNORD116-1-201ENST00000384335 95 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 SNORA24.1-201ENST00000384401 135 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 Y_RNA.553-201ENST00000384670 102 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 SNORA41-201ENST00000384675 132 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 RNA5SP508-201ENST00000411327 119 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC133104.1-201ENST00000429100 218 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM23P36406 AL161651.1-201ENST00000440882 223 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM23P36406 RNU7-26P-201ENST00000458980 63 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM23P36406 AC139453.3-201ENST00000493276 369 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM23P36406 SNORD27.1-201ENST00000516319 72 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TRIM23P36406 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM23P36406 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM23P36406 AC091544.4-201ENST00000555268 342 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AL121821.2-201ENST00000556081 394 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 MIR4782-201ENST00000577987 79 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 MIR3945-201ENST00000581853 98 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 NBR2-204ENST00000587322 63 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC040904.1-201ENST00000590850 223 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 MIR98-201ENST00000606724 119 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC006566.1-201ENST00000608943 513 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC005332.10-201ENST00000612725 619 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 MIR6134-201ENST00000617606 109 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AL449363.1-201ENST00000617815 186 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 uc_338.11-201ENST00000619132 160 ntBASIC2.39□□□□□ -2.03
TRIM23P36406 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM23P36406 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM23P36406 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM23P36406 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM23P36406 CDC27P3-201ENST00000635418 1910 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TRIM23P36406 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM23P36406 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM23P36406 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM23P36406 SNORA75-201ENST00000384158 137 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 SNORD116-2-201ENST00000384274 95 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 SNORD116-6-201ENST00000384711 96 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 MIR147B-201ENST00000390185 80 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM23P36406 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM23P36406 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.38□□□□□ -2.03
TRIM23P36406 AL390237.1-201ENST00000404226 1415 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms