Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 RNA5SP112-201ENST00000515937 99 ntBASIC2.02□□□□□ -2.09
RORAP35398 RNU6-914P-201ENST00000516749 109 ntBASIC2.02□□□□□ -2.09
RORAP35398 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.02□□□□□ -2.09
RORAP35398 MIR3126-201ENST00000577443 74 ntBASIC2.02□□□□□ -2.09
RORAP35398 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
RORAP35398 LRRC37A5P-203ENST00000580181 585 ntBASIC2.02□□□□□ -2.09
RORAP35398 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.02□□□□□ -2.09
RORAP35398 AC022893.3-201ENST00000607665 437 ntBASIC2.02□□□□□ -2.09
RORAP35398 AC004223.4-201ENST00000612426 332 ntBASIC2.02□□□□□ -2.09
RORAP35398 MIR6134-201ENST00000617606 109 ntBASIC2.02□□□□□ -2.09
RORAP35398 AC010378.1-201ENST00000619270 362 ntBASIC2.02□□□□□ -2.09
RORAP35398 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RORAP35398 RNU1-148P-201ENST00000384472 162 ntBASIC2.01□□□□□ -2.09
RORAP35398 MIR518D-201ENST00000385014 87 ntBASIC2.01□□□□□ -2.09
RORAP35398 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.01□□□□□ -2.09
RORAP35398 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RORAP35398 Y_RNA.608-201ENST00000410647 95 ntBASIC2.01□□□□□ -2.09
RORAP35398 RNU2-63P-201ENST00000410792 194 ntBASIC2.01□□□□□ -2.09
RORAP35398 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
RORAP35398 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.01□□□□□ -2.09
RORAP35398 RPS15AP12-201ENST00000419498 388 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC005005.2-201ENST00000420779 380 ntBASIC2.01□□□□□ -2.09
RORAP35398 AL591212.2-201ENST00000433923 257 ntBASIC2.01□□□□□ -2.09
RORAP35398 MTCYBP39-201ENST00000437562 491 ntBASIC2.01□□□□□ -2.09
RORAP35398 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RORAP35398 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.01□□□□□ -2.09
RORAP35398 AL590365.1-201ENST00000450788 243 ntBASIC2.01□□□□□ -2.09
RORAP35398 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
RORAP35398 AP001324.2-201ENST00000461163 319 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC109927.2-201ENST00000506416 303 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.01□□□□□ -2.09
RORAP35398 RNA5SP337-201ENST00000517007 109 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.01□□□□□ -2.09
RORAP35398 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.01□□□□□ -2.09
RORAP35398 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.01□□□□□ -2.09
RORAP35398 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.01□□□□□ -2.09
RORAP35398 MIR4782-201ENST00000577987 79 ntBASIC2.01□□□□□ -2.09
RORAP35398 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC138749.5-201ENST00000611461 208 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.01□□□□□ -2.09
RORAP35398 MIR7844-201ENST00000616161 122 ntBASIC2.01□□□□□ -2.09
RORAP35398 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RORAP35398 AC116165.2-201ENST00000616705 206 ntBASIC2.01□□□□□ -2.09
RORAP35398 AL162373.1-201ENST00000620433 407 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RORAP35398 AP003400.5-201ENST00000624827 617 ntBASIC2.01□□□□□ -2.09
RORAP35398 AC099654.13-201ENST00000639774 207 ntBASIC2.01□□□□□ -2.09
RORAP35398 AL109809.4-201ENST00000603520 2185 ntBASIC2□□□□□ -2.09
RORAP35398 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2□□□□□ -2.09
RORAP35398 RNU6-960P-201ENST00000364056 120 ntBASIC2□□□□□ -2.09
RORAP35398 MIR301A-201ENST00000385261 86 ntBASIC2□□□□□ -2.09
RORAP35398 GSTA9P-201ENST00000406231 611 ntBASIC2□□□□□ -2.09
RORAP35398 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2□□□□□ -2.09
RORAP35398 AC010099.3-201ENST00000423896 409 ntBASIC2□□□□□ -2.09
RORAP35398 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2□□□□□ -2.09
RORAP35398 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
RORAP35398 AL591704.1-201ENST00000432574 275 ntBASIC2□□□□□ -2.09
RORAP35398 AL591719.1-201ENST00000444669 744 ntBASIC2□□□□□ -2.09
RORAP35398 AC104435.1-201ENST00000483483 166 ntBASIC2□□□□□ -2.09
RORAP35398 AC109486.1-201ENST00000486833 374 ntBASIC2□□□□□ -2.09
RORAP35398 RPS3AP22-201ENST00000488297 769 ntBASIC2□□□□□ -2.09
RORAP35398 CKS1BP2-201ENST00000497342 240 ntBASIC2□□□□□ -2.09
RORAP35398 FAM92A1P2-202ENST00000504766 877 ntBASIC2□□□□□ -2.09
RORAP35398 AC005178.1-201ENST00000508392 440 ntBASIC2□□□□□ -2.09
RORAP35398 RNU6-572P-201ENST00000516724 80 ntBASIC2□□□□□ -2.09
RORAP35398 RNU6-677P-201ENST00000516914 101 ntBASIC2□□□□□ -2.09
RORAP35398 SNORA31.25-201ENST00000517242 134 ntBASIC2□□□□□ -2.09
RORAP35398 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2□□□□□ -2.09
RORAP35398 OR5B19P-201ENST00000531766 928 ntBASIC2□□□□□ -2.09
RORAP35398 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2□□□□□ -2.09
RORAP35398 AL031775.1-201ENST00000607014 887 ntBASIC2□□□□□ -2.09
RORAP35398 AC027807.2-201ENST00000616099 408 ntBASIC2□□□□□ -2.09
RORAP35398 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
RORAP35398 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RORAP35398 HSPA8P4-201ENST00000511877 1920 ntBASIC1.99□□□□□ -2.09
RORAP35398 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
RORAP35398 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU6-748P-201ENST00000384648 107 ntBASIC1.99□□□□□ -2.09
RORAP35398 SNORA40C-201ENST00000391285 128 ntBASIC1.99□□□□□ -2.09
RORAP35398 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.99□□□□□ -2.09
RORAP35398 AC007283.2-201ENST00000424739 197 ntBASIC1.99□□□□□ -2.09
RORAP35398 AIMP1P2-201ENST00000425294 312 ntBASIC1.99□□□□□ -2.09
RORAP35398 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.99□□□□□ -2.09
RORAP35398 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.99□□□□□ -2.09
RORAP35398 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.99□□□□□ -2.09
RORAP35398 AL441985.1-201ENST00000457727 251 ntBASIC1.99□□□□□ -2.09
RORAP35398 PMCHL2-203ENST00000457791 237 ntBASIC1.99□□□□□ -2.09
RORAP35398 AL139824.2-201ENST00000458731 1095 ntBASIC1.99□□□□□ -2.09
RORAP35398 RPL21P99-201ENST00000480369 423 ntBASIC1.99□□□□□ -2.09
RORAP35398 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.99□□□□□ -2.09
RORAP35398 AC007182.2-201ENST00000489251 402 ntBASIC1.99□□□□□ -2.09
RORAP35398 RPL22P13-201ENST00000493291 347 ntBASIC1.99□□□□□ -2.09
RORAP35398 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms