Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 MTND4P7-201ENST00000523876 130 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 MTCO3P23-201ENST00000561363 289 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC026464.5-201ENST00000562497 722 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC004832.5-201ENST00000608677 401 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AC092807.2-201ENST00000609367 243 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.812-201ENST00000610788 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.784-201ENST00000613803 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.787-201ENST00000616522 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.780-201ENST00000617336 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.801-201ENST00000619005 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AC027309.3-201ENST00000623419 351 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
HOXA11P31270 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA11P31270 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA11P31270 MTND4P14-201ENST00000435799 1354 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA11P31270 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.58-201ENST00000362807 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.67-201ENST00000362870 100 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 SNORA63-201ENST00000363450 132 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.154-201ENST00000363624 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 RNY3P1-201ENST00000365085 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.315-201ENST00000365117 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 RNY3-201ENST00000365484 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA11P31270 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA11P31270 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.490-201ENST00000384413 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HOXA11P31270 NDUFB4P5-201ENST00000415445 361 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 PPP1R11P2-201ENST00000423543 382 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA11P31270 AC006539.3-201ENST00000454258 129 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 Y_RNA.632-201ENST00000459189 102 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 SNORD19B-201ENST00000459623 84 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AC010631.1-201ENST00000474150 156 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 OR11H5P-201ENST00000554039 926 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AC005668.1-201ENST00000571142 476 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.24□□□□□ -1.89
HOXA11P31270 AC008521.1-201ENST00000587471 187 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 POLR3GP2-201ENST00000588366 668 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 HSPE1P7-201ENST00000604681 321 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 PART1_1.1-201ENST00000611761 217 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 SCARNA15.3-201ENST00000626315 122 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 SCARNA4.1-201ENST00000628597 123 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 AL133216.2-202ENST00000634512 349 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 U6.114-201ENST00000636407 96 ntBASIC3.24□□□□□ -1.89
HOXA11P31270 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HOXA11P31270 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA11P31270 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA11P31270 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HOXA11P31270 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HOXA11P31270 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA11P31270 RNU6-550P-201ENST00000391057 101 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 RPL32P35-201ENST00000415214 394 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 UBE2FP1-201ENST00000416536 447 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 RPL7P10-201ENST00000417407 739 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.23□□□□□ -1.89
HOXA11P31270 AL356867.1-201ENST00000429623 299 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXA11P31270 PRPS1P1-201ENST00000445305 876 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA11P31270 RPS26P21-201ENST00000475397 348 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 RPL31P60-201ENST00000478450 367 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.23□□□□□ -1.89
HOXA11P31270 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA11P31270 AP000867.2-201ENST00000532468 320 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.23□□□□□ -1.89
HOXA11P31270 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HOXA11P31270 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AC103705.1-201ENST00000619013 241 ntBASIC3.23□□□□□ -1.89
HOXA11P31270 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.23□□□□□ -1.89
HOXA11P31270 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HOXA11P31270 SNORD42.2-201ENST00000365570 69 ntBASIC3.22□□□□□ -1.89
HOXA11P31270 Y_RNA.378-201ENST00000365652 113 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms