Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.95□□□□□ -1.78
CNGA1P29973 UBE2DNL-203ENST00000474922 222 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.95□□□□□ -1.78
CNGA1P29973 PHBP14-201ENST00000512887 367 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 MIR4325-201ENST00000583049 90 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 MIR3672-201ENST00000584290 82 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.95□□□□□ -1.78
CNGA1P29973 AL451007.1-201ENST00000595491 289 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 NUTF2P8-201ENST00000604593 363 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AC123912.5-201ENST00000605470 343 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 uc_338.5-201ENST00000611839 155 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 Y_RNA.804-201ENST00000615262 101 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AC006386.2-201ENST00000624491 75 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AC012005.1-201ENST00000624575 75 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNGA1P29973 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.94□□□□□ -1.78
CNGA1P29973 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CNGA1P29973 Y_RNA.135-201ENST00000363439 95 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 RNU6-72P-201ENST00000384285 79 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AL356432.1-201ENST00000405809 419 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AC016831.2-201ENST00000417179 352 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 COTL1P1-201ENST00000422309 375 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AL365400.1-201ENST00000431854 640 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 HIGD1AP11-201ENST00000438361 280 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 MTND4LP16-201ENST00000440828 295 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AL359672.1-201ENST00000442302 409 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 SNRPEP8-201ENST00000442866 260 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.94□□□□□ -1.78
CNGA1P29973 HMGN2P10-201ENST00000448085 265 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AL031183.1-201ENST00000457667 207 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.94□□□□□ -1.78
CNGA1P29973 RNU6-579P-201ENST00000516879 102 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AL163153.1-201ENST00000554223 283 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 LARP7P3-201ENST00000579888 337 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 AC023043.2-201ENST00000589678 1026 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNGA1P29973 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNGA1P29973 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CNGA1P29973 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNGA1P29973 AC073073.2-201ENST00000609827 2578 ntBASIC3.94□□□□□ -1.78
CNGA1P29973 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNGA1P29973 CDC27P3-201ENST00000635418 1910 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 AC138393.1-203ENST00000327086 343 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 Y_RNA.142-201ENST00000363491 102 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 Y_RNA.212-201ENST00000364177 102 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 RNA5SP42-201ENST00000364278 115 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 Y_RNA.263-201ENST00000364659 114 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 RNU6-898P-201ENST00000365627 104 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 RNU6-128P-201ENST00000383976 107 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 MIR184-201ENST00000384962 84 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AL391417.1-201ENST00000404100 426 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AL096701.2-201ENST00000416920 238 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 MRPL50P4-201ENST00000446432 475 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 MRPS31P2-201ENST00000451581 518 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 PPP1R2P5-201ENST00000457256 603 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 AC103851.1-201ENST00000506833 274 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.93□□□□□ -1.78
CNGA1P29973 Y_RNA.687-201ENST00000516558 91 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 RNU6-1088P-201ENST00000516850 104 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 SNORD59.2-201ENST00000516873 68 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 SNORA31.21-201ENST00000517180 77 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.93□□□□□ -1.78
CNGA1P29973 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.93□□□□□ -1.78
CNGA1P29973 RNU6-85P-201ENST00000605989 107 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 RMST_8.1-201ENST00000610287 165 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AL138726.1-201ENST00000614873 333 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 AL133216.2-202ENST00000634512 349 ntBASIC3.93□□□□□ -1.78
CNGA1P29973 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNGA1P29973 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNGA1P29973 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
CNGA1P29973 Y_RNA.184-201ENST00000363884 108 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CNGA1P29973 U3.37-201ENST00000408528 213 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.92□□□□□ -1.78
CNGA1P29973 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.92□□□□□ -1.78
CNGA1P29973 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 ARF4P2-201ENST00000430209 526 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.92□□□□□ -1.78
CNGA1P29973 BTF3P15-201ENST00000455606 336 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AMD1P1-201ENST00000457220 922 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 FCF1P8-201ENST00000510322 597 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.92□□□□□ -1.78
CNGA1P29973 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.92□□□□□ -1.78
CNGA1P29973 AP005597.4-201ENST00000526762 229 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AC025423.5-201ENST00000550230 219 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 EIF4BP1-201ENST00000554881 351 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AC005668.1-201ENST00000571142 476 ntBASIC3.92□□□□□ -1.78
CNGA1P29973 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms