Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR4716-201ENST00000579628 84 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.62□□□□□ -1.83
POLR2AP24928 AL138726.1-201ENST00000614873 333 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC131238.1-201ENST00000617135 328 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC141273.2-201ENST00000618989 130 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.62□□□□□ -1.83
POLR2AP24928 AC007390.2-201ENST00000606229 3803 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-99P-201ENST00000364721 107 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 RNU6-637P-201ENST00000384050 107 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 AL136372.1-201ENST00000403060 228 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR2AP24928 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR2AP24928 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
POLR2AP24928 RPL30P15-201ENST00000457129 321 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 TRBV12-1-201ENST00000479785 344 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.62□□□□□ -1.83
POLR2AP24928 AC087854.1-201ENST00000519706 414 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AP000859.1-201ENST00000525536 307 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AP000763.2-201ENST00000540641 163 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC079600.2-201ENST00000550076 130 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 AC008269.2-201ENST00000561915 1105 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 CYCSP39-201ENST00000565821 309 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
POLR2AP24928 AL138825.1-201ENST00000618587 192 ntBASIC3.62□□□□□ -1.83
POLR2AP24928 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR2AP24928 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR2AP24928 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
POLR2AP24928 RNU6-1252P-201ENST00000363054 104 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 Y_RNA.153-201ENST00000363615 91 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 HMGN2P8-201ENST00000391458 268 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 RNU6-174P-201ENST00000410406 106 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR2AP24928 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.61□□□□□ -1.83
POLR2AP24928 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AC016065.2-201ENST00000514530 444 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 RNA5SP154-201ENST00000516193 111 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR2AP24928 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.61□□□□□ -1.83
POLR2AP24928 AC091544.4-201ENST00000555268 342 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR2AP24928 CPDP1-201ENST00000579660 283 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR2AP24928 AL034351.1-201ENST00000605288 668 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AC015813.4-201ENST00000610469 179 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AL021879.1-201ENST00000611756 288 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 uc_338.32-201ENST00000615087 172 ntBASIC3.61□□□□□ -1.83
POLR2AP24928 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR2AP24928 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
POLR2AP24928 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 AC010615.1-201ENST00000594254 1764 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 Y_RNA.148-201ENST00000363557 117 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 SNORD115-7-201ENST00000365306 82 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 SNORD70.1-201ENST00000391007 85 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC003685.2-201ENST00000422795 395 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 RPL30P3-201ENST00000424262 333 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC099799.1-201ENST00000439809 192 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 FCF1P4-201ENST00000448326 183 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AL162389.1-201ENST00000449233 177 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 RNU7-187P-201ENST00000458985 68 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 RPL23AP67-201ENST00000465341 474 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC117440.1-201ENST00000474107 571 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC092451.1-201ENST00000480211 153 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.6□□□□□ -1.83
POLR2AP24928 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR2AP24928 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.6□□□□□ -1.83
POLR2AP24928 AC091925.2-201ENST00000625059 256 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC018555.1-201ENST00000567548 1980 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
POLR2AP24928 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR2AP24928 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 SNORA24.1-201ENST00000384401 135 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 SNORA41-201ENST00000384675 132 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 MT-TR-201ENST00000387439 65 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 RNU6-1050P-201ENST00000410388 107 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 UBE2D3P2-201ENST00000424409 445 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC087499.2-201ENST00000432861 149 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.6□□□□□ -1.83
POLR2AP24928 AC008571.1-201ENST00000467232 300 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 YWHAEP4-201ENST00000505390 198 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC009901.1-201ENST00000506703 541 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR2AP24928 Y_RNA.720-201ENST00000517166 92 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
POLR2AP24928 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.6□□□□□ -1.83
POLR2AP24928 SETP7-201ENST00000552169 453 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
POLR2AP24928 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
POLR2AP24928 AC012119.1-201ENST00000603184 222 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AL442067.1-201ENST00000613261 223 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.6□□□□□ -1.83
POLR2AP24928 AL450472.3-201ENST00000615578 367 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms