Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AC245047.7-201ENST00000440265 293 ntBASIC-0.18□□□□□ -2.44
VCANP13611 RPL31P3-201ENST00000458430 332 ntBASIC-0.18□□□□□ -2.44
VCANP13611 RNU7-26P-201ENST00000458980 63 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AC136618.2-201ENST00000575091 400 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AC093913.1-201ENST00000614178 329 ntBASIC-0.18□□□□□ -2.44
VCANP13611 MIR6134-201ENST00000617606 109 ntBASIC-0.18□□□□□ -2.44
VCANP13611 PRELID3BP11-201ENST00000414230 479 ntBASIC-0.18□□□□□ -2.44
VCANP13611 HSPE1P13-201ENST00000451143 297 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AC114982.1-201ENST00000469402 321 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC-0.18□□□□□ -2.44
VCANP13611 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
VCANP13611 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.18□□□□□ -2.44
VCANP13611 AC040174.2-201ENST00000602701 465 ntBASIC-0.18□□□□□ -2.44
VCANP13611 AL136363.1-201ENST00000605349 337 ntBASIC-0.18□□□□□ -2.44
VCANP13611 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
VCANP13611 AC007363.1-201ENST00000604736 620 ntBASIC-0.19□□□□□ -2.44
VCANP13611 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC-0.19□□□□□ -2.44
VCANP13611 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.19□□□□□ -2.44
VCANP13611 SNORA51.2-201ENST00000364595 132 ntBASIC-0.19□□□□□ -2.44
VCANP13611 AP005902.1-201ENST00000521358 186 ntBASIC-0.19□□□□□ -2.44
VCANP13611 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC-0.19□□□□□ -2.44
VCANP13611 AC090625.1-201ENST00000357130 210 ntBASIC-0.2□□□□□ -2.44
VCANP13611 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.2□□□□□ -2.44
VCANP13611 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.2□□□□□ -2.44
VCANP13611 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.2□□□□□ -2.44
VCANP13611 AC015726.3-201ENST00000624501 418 ntBASIC-0.2□□□□□ -2.44
VCANP13611 AC110079.1-202ENST00000635213 138 ntBASIC-0.2□□□□□ -2.44
VCANP13611 HMGN2P21-201ENST00000447764 270 ntBASIC-0.2□□□□□ -2.44
VCANP13611 SNORA31.18-201ENST00000517043 134 ntBASIC-0.2□□□□□ -2.44
VCANP13611 AC025594.3-201ENST00000613068 790 ntBASIC-0.2□□□□□ -2.44
VCANP13611 USP9YP24-201ENST00000434374 697 ntBASIC-0.2□□□□□ -2.44
VCANP13611 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.2□□□□□ -2.44
VCANP13611 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC-0.2□□□□□ -2.44
VCANP13611 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC-0.2□□□□□ -2.44
VCANP13611 RNU4-45P-201ENST00000365469 141 ntBASIC-0.21□□□□□ -2.44
VCANP13611 RNU6-10P-201ENST00000384036 107 ntBASIC-0.21□□□□□ -2.44
VCANP13611 RNU6-15P-201ENST00000384534 107 ntBASIC-0.21□□□□□ -2.44
VCANP13611 RNU6-272P-201ENST00000411028 104 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AP003122.4-201ENST00000530980 758 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC-0.21□□□□□ -2.44
VCANP13611 AL121992.2-201ENST00000606262 256 ntBASIC-0.21□□□□□ -2.44
VCANP13611 Y_RNA.67-201ENST00000362870 100 ntBASIC-0.21□□□□□ -2.44
VCANP13611 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC-0.21□□□□□ -2.44
VCANP13611 RNU6-968P-201ENST00000384076 107 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AL512844.2-201ENST00000433990 593 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AL133373.1-201ENST00000497098 94 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AC106791.2-201ENST00000604680 391 ntBASIC-0.21□□□□□ -2.44
VCANP13611 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.21□□□□□ -2.44
VCANP13611 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
VCANP13611 ARPC3P5-201ENST00000448802 534 ntBASIC-0.22□□□□□ -2.44
VCANP13611 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC-0.22□□□□□ -2.44
VCANP13611 AC090888.2-201ENST00000559765 1144 ntBASIC-0.22□□□□□ -2.44
VCANP13611 MIR4290-201ENST00000583807 95 ntBASIC-0.22□□□□□ -2.44
VCANP13611 AC004492.1-201ENST00000607036 742 ntBASIC-0.22□□□□□ -2.44
VCANP13611 AP002791.1-201ENST00000623291 381 ntBASIC-0.22□□□□□ -2.44
VCANP13611 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.22□□□□□ -2.44
VCANP13611 RPS26P5-201ENST00000418544 335 ntBASIC-0.22□□□□□ -2.44
VCANP13611 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.22□□□□□ -2.44
VCANP13611 AC096531.1-201ENST00000419107 107 ntBASIC-0.22□□□□□ -2.44
VCANP13611 PGBD4P5-201ENST00000445958 426 ntBASIC-0.22□□□□□ -2.44
VCANP13611 RNU1-61P-201ENST00000516107 151 ntBASIC-0.22□□□□□ -2.44
VCANP13611 SNORA31.13-201ENST00000516624 135 ntBASIC-0.22□□□□□ -2.44
VCANP13611 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.22□□□□□ -2.44
VCANP13611 MIR3165-201ENST00000579874 75 ntBASIC-0.22□□□□□ -2.44
VCANP13611 MIR4441-201ENST00000582623 100 ntBASIC-0.22□□□□□ -2.44
VCANP13611 uc_338.36-201ENST00000622331 158 ntBASIC-0.22□□□□□ -2.44
VCANP13611 RNFT1P2-201ENST00000443064 757 ntBASIC-0.22□□□□□ -2.45
VCANP13611 AP001025.1-201ENST00000486139 332 ntBASIC-0.22□□□□□ -2.45
VCANP13611 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC-0.22□□□□□ -2.45
VCANP13611 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
VCANP13611 AL591926.4-201ENST00000616895 298 ntBASIC-0.22□□□□□ -2.45
VCANP13611 SNORA63D-201ENST00000364359 132 ntBASIC-0.23□□□□□ -2.45
VCANP13611 RNU2-71P-201ENST00000411395 189 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.23□□□□□ -2.45
VCANP13611 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC-0.23□□□□□ -2.45
VCANP13611 MTATP6P7-201ENST00000453315 681 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AC022493.2-201ENST00000506122 481 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AC112518.2-201ENST00000508565 425 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AL132822.1-201ENST00000617063 513 ntBASIC-0.23□□□□□ -2.45
VCANP13611 RNA5SP275-201ENST00000363936 118 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AL353898.1-201ENST00000444055 238 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC-0.23□□□□□ -2.45
VCANP13611 MIR4713-201ENST00000582691 75 ntBASIC-0.23□□□□□ -2.45
VCANP13611 AC021506.2-201ENST00000612354 169 ntBASIC-0.23□□□□□ -2.45
VCANP13611 RNU6-26P-201ENST00000383985 107 ntBASIC-0.24□□□□□ -2.45
VCANP13611 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC-0.24□□□□□ -2.45
VCANP13611 AC093106.2-201ENST00000428212 385 ntBASIC-0.24□□□□□ -2.45
VCANP13611 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC-0.24□□□□□ -2.45
VCANP13611 ANKRD26P4-201ENST00000455755 950 ntBASIC-0.24□□□□□ -2.45
VCANP13611 AC108740.1-201ENST00000498629 225 ntBASIC-0.24□□□□□ -2.45
VCANP13611 AP001596.2-201ENST00000608410 312 ntBASIC-0.24□□□□□ -2.45
VCANP13611 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
VCANP13611 RNA5SP214-201ENST00000363378 118 ntBASIC-0.24□□□□□ -2.45
VCANP13611 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC-0.24□□□□□ -2.45
VCANP13611 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.24□□□□□ -2.45
VCANP13611 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
VCANP13611 MTATP6P9-201ENST00000515039 680 ntBASIC-0.24□□□□□ -2.45
VCANP13611 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.25□□□□□ -2.45
VCANP13611 SNORD126-201ENST00000459475 77 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms