Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXD8P13378 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HOXD8P13378 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
HOXD8P13378 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXD8P13378 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HOXD8P13378 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HOXD8P13378 RNU6-21P-201ENST00000384710 107 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 SNORA40C-201ENST00000391285 128 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXD8P13378 AL590383.1-201ENST00000428602 75 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AC098831.1-201ENST00000440661 216 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AC009296.1-201ENST00000443146 155 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXD8P13378 AC092798.1-201ENST00000458542 409 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 RNA5SP165-201ENST00000517142 115 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AC023632.4-201ENST00000517783 191 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.63□□□□□ -1.67
HOXD8P13378 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXD8P13378 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.63□□□□□ -1.67
HOXD8P13378 MIR3921-201ENST00000577308 85 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AL162424.1-201ENST00000602325 221 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 AP002826.1-201ENST00000608835 315 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 U6.99-201ENST00000637524 83 ntBASIC4.63□□□□□ -1.67
HOXD8P13378 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.63□□□□□ -1.67
HOXD8P13378 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HOXD8P13378 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HOXD8P13378 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HOXD8P13378 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
HOXD8P13378 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HOXD8P13378 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.62□□□□□ -1.67
HOXD8P13378 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HOXD8P13378 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 SNORA25.1-201ENST00000362326 128 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 RNU6-78P-201ENST00000362897 107 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 RNU6-682P-201ENST00000363843 106 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 RNU6-166P-201ENST00000384371 107 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 MIR1290-201ENST00000408735 78 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 Y_RNA.590-201ENST00000410140 107 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 Z85995.1-201ENST00000415547 335 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD8P13378 AL358453.1-201ENST00000422522 250 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 RPL27AP8-201ENST00000424277 446 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.62□□□□□ -1.67
HOXD8P13378 AC006011.1-201ENST00000442758 349 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 HSPE1P25-201ENST00000455484 251 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD8P13378 AC074198.2-201ENST00000508153 258 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 SCARNA13-201ENST00000516672 275 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 RNU2-31P-201ENST00000516954 155 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 MRPS36P4-201ENST00000534436 298 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD8P13378 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.62□□□□□ -1.67
HOXD8P13378 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD8P13378 SNORD113-5-201ENST00000607261 78 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 U4.7-201ENST00000638126 106 ntBASIC4.62□□□□□ -1.67
HOXD8P13378 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD8P13378 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
HOXD8P13378 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HOXD8P13378 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HOXD8P13378 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD8P13378 AC116096.1-201ENST00000566804 2314 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HOXD8P13378 Y_RNA.333-201ENST00000365274 102 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 RN7SKP202-201ENST00000410439 330 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 RNU2-68P-201ENST00000410878 191 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 CYCSP19-201ENST00000411715 316 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD8P13378 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.61□□□□□ -1.67
HOXD8P13378 KC877373.1-201ENST00000479066 408 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.61□□□□□ -1.67
HOXD8P13378 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD8P13378 Y_RNA.662-201ENST00000516028 97 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 Y_RNA.683-201ENST00000516508 93 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 AC072026.1-201ENST00000605023 201 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 AC004832.4-201ENST00000608952 331 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 AC027309.3-201ENST00000623419 351 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 SCARNA4-202ENST00000625402 129 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 AL672167.1-203ENST00000641299 2975 ntBASIC4.61□□□□□ -1.67
HOXD8P13378 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HOXD8P13378 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.61□□□□□ -1.67
HOXD8P13378 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HOXD8P13378 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
HOXD8P13378 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXD8P13378 SNORA71.3-201ENST00000362582 128 ntBASIC4.6□□□□□ -1.67
HOXD8P13378 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms