Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-415P-201ENST00000516252 97 ntBASIC1.6□□□□□ -2.15
CD28P10747 RNU5B-3P-201ENST00000516601 115 ntBASIC1.6□□□□□ -2.15
CD28P10747 RNU6-295P-201ENST00000516901 104 ntBASIC1.6□□□□□ -2.15
CD28P10747 RNA5SP337-201ENST00000517007 109 ntBASIC1.6□□□□□ -2.15
CD28P10747 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.6□□□□□ -2.15
CD28P10747 AC012435.1-202ENST00000568772 240 ntBASIC1.6□□□□□ -2.15
CD28P10747 MIR5697-201ENST00000578045 78 ntBASIC1.6□□□□□ -2.15
CD28P10747 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.6□□□□□ -2.15
CD28P10747 AC234772.3-201ENST00000602277 528 ntBASIC1.6□□□□□ -2.15
CD28P10747 SNORD14A-201ENST00000606526 91 ntBASIC1.6□□□□□ -2.15
CD28P10747 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.6□□□□□ -2.15
CD28P10747 AL031775.1-201ENST00000607014 887 ntBASIC1.6□□□□□ -2.15
CD28P10747 MIR15A-201ENST00000607334 83 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.15-201ENST00000611544 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 AC004223.4-201ENST00000612426 332 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.16-201ENST00000613119 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.12-201ENST00000613778 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.20-201ENST00000613956 192 ntBASIC1.6□□□□□ -2.15
CD28P10747 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.9-201ENST00000615427 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.11-201ENST00000616345 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 AC009233.1-201ENST00000616477 371 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.2-201ENST00000616535 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.3-201ENST00000617785 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.19-201ENST00000618602 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 RNU2-1-201ENST00000618664 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 AL353997.5-201ENST00000618886 171 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.6-201ENST00000619225 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.5-201ENST00000619465 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 U2.10-201ENST00000620268 191 ntBASIC1.6□□□□□ -2.15
CD28P10747 AC092192.1-201ENST00000633154 1018 ntBASIC1.6□□□□□ -2.15
CD28P10747 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD28P10747 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD28P10747 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CD28P10747 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.6□□□□□ -2.15
CD28P10747 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.6□□□□□ -2.15
CD28P10747 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CD28P10747 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CD28P10747 Y_RNA.33-201ENST00000362591 102 ntBASIC1.59□□□□□ -2.15
CD28P10747 RNU6-898P-201ENST00000365627 104 ntBASIC1.59□□□□□ -2.15
CD28P10747 RNU6-190P-201ENST00000384154 102 ntBASIC1.59□□□□□ -2.15
CD28P10747 MIR95-201ENST00000385072 81 ntBASIC1.59□□□□□ -2.15
CD28P10747 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CD28P10747 CIR1P3-201ENST00000405137 479 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL139156.1-201ENST00000412785 841 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 AC092809.3-201ENST00000415453 231 ntBASIC1.59□□□□□ -2.15
CD28P10747 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.59□□□□□ -2.15
CD28P10747 AC007560.1-201ENST00000426912 237 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC093106.2-201ENST00000428212 385 ntBASIC1.59□□□□□ -2.15
CD28P10747 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.59□□□□□ -2.15
CD28P10747 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.59□□□□□ -2.15
CD28P10747 MTCYBP39-201ENST00000437562 491 ntBASIC1.59□□□□□ -2.15
CD28P10747 RPL22P17-201ENST00000438729 315 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.59□□□□□ -2.15
CD28P10747 IPO7P1-201ENST00000442031 636 ntBASIC1.59□□□□□ -2.15
CD28P10747 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 AC104058.1-201ENST00000448028 297 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.59□□□□□ -2.15
CD28P10747 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL139824.2-201ENST00000458731 1095 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC104435.1-201ENST00000483483 166 ntBASIC1.59□□□□□ -2.15
CD28P10747 RPL22P13-201ENST00000493291 347 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC090255.1-201ENST00000495779 349 ntBASIC1.59□□□□□ -2.15
CD28P10747 FAM92A1P2-202ENST00000504766 877 ntBASIC1.59□□□□□ -2.15
CD28P10747 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 RNU6-1129P-201ENST00000515964 104 ntBASIC1.59□□□□□ -2.15
CD28P10747 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.59□□□□□ -2.15
CD28P10747 MTND4LP18-201ENST00000526864 291 ntBASIC1.59□□□□□ -2.15
CD28P10747 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CD28P10747 AC011494.1-201ENST00000596454 237 ntBASIC1.59□□□□□ -2.15
CD28P10747 MTCYBP22-201ENST00000603788 447 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL359999.1-201ENST00000604513 294 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL121917.1-203ENST00000605534 577 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL451064.1-201ENST00000607718 471 ntBASIC1.59□□□□□ -2.15
CD28P10747 AC130324.3-201ENST00000614165 542 ntBASIC1.59□□□□□ -2.15
CD28P10747 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.59□□□□□ -2.15
CD28P10747 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.59□□□□□ -2.16
CD28P10747 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.58□□□□□ -2.16
CD28P10747 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 AC103710.2-202ENST00000641454 2853 ntBASIC1.58□□□□□ -2.16
CD28P10747 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CD28P10747 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.58□□□□□ -2.16
CD28P10747 RNU6-1280P-201ENST00000365211 107 ntBASIC1.58□□□□□ -2.16
CD28P10747 RNU6-395P-201ENST00000365662 106 ntBASIC1.58□□□□□ -2.16
CD28P10747 RNU1-148P-201ENST00000384472 162 ntBASIC1.58□□□□□ -2.16
CD28P10747 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
CD28P10747 RNU6-1025P-201ENST00000410629 104 ntBASIC1.58□□□□□ -2.16
CD28P10747 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.58□□□□□ -2.16
CD28P10747 MTND1P23-201ENST00000416931 372 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC097463.2-201ENST00000421074 142 ntBASIC1.58□□□□□ -2.16
CD28P10747 AL593851.1-201ENST00000426171 157 ntBASIC1.58□□□□□ -2.16
CD28P10747 AC027124.2-201ENST00000428249 105 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms