Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC145146.1-201ENST00000496370 254 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AL163195.1-201ENST00000496941 348 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 MTCYBP43-201ENST00000513621 740 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AC008945.2-201ENST00000606056 604 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AC090617.9-201ENST00000623751 147 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AC138393.1-203ENST00000327086 343 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN1P05114 Y_RNA.327-201ENST00000365201 102 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 RNU6-53P-201ENST00000365367 106 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 SNORA25-201ENST00000384384 134 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 MRPL35P1-201ENST00000404272 572 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN1P05114 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.69□□□□□ -2.3
HMGN1P05114 AL035666.1-201ENST00000446195 348 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN1P05114 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.69□□□□□ -2.3
HMGN1P05114 RNU6-678P-201ENST00000516832 109 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.69□□□□□ -2.3
HMGN1P05114 AP000942.3-201ENST00000603702 160 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 AL583856.2-201ENST00000606298 543 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 AC012360.2-201ENST00000609349 391 ntBASIC0.69□□□□□ -2.3
HMGN1P05114 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
HMGN1P05114 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HMGN1P05114 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
HMGN1P05114 RNU2-28P-201ENST00000410457 189 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC132479.1-201ENST00000449160 144 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 MTND3P4-201ENST00000453537 303 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC013267.1-201ENST00000458227 267 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.68□□□□□ -2.3
HMGN1P05114 ARL2BPP4-201ENST00000506854 471 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.68□□□□□ -2.3
HMGN1P05114 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC022616.8-201ENST00000533569 253 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.68□□□□□ -2.3
HMGN1P05114 AC090502.2-201ENST00000549267 280 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 SUB1P4-201ENST00000566062 339 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC023824.3-201ENST00000569003 562 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC098848.2-201ENST00000588023 330 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 CLIC4P2-201ENST00000601934 717 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 RNU6-91P-201ENST00000607774 107 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC010133.1-201ENST00000615809 842 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AL132822.1-201ENST00000617063 513 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 AC008993.2-201ENST00000631744 806 ntBASIC0.68□□□□□ -2.3
HMGN1P05114 DBF4P1-201ENST00000412976 1892 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 RNU6-582P-201ENST00000362989 107 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 RNU6-23P-201ENST00000363283 107 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 SNORA27.3-201ENST00000364937 134 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGN1P05114 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN1P05114 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN1P05114 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN1P05114 RPL26P26-201ENST00000480251 434 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 AL163540.1-201ENST00000485382 386 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 AC108078.1-201ENST00000508073 725 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 RNU6-322P-201ENST00000516010 103 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 ACA59.2-201ENST00000517061 156 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN1P05114 AP003392.2-201ENST00000527269 208 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HMGN1P05114 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.67□□□□□ -2.3
HMGN1P05114 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.67□□□□□ -2.3
HMGN1P05114 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN1P05114 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.67□□□□□ -2.3
HMGN1P05114 Z82243.1-201ENST00000609432 473 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 AC107905.1-201ENST00000616204 426 ntBASIC0.67□□□□□ -2.3
HMGN1P05114 Y_RNA.140-201ENST00000363474 103 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 RNA5SP99-201ENST00000364020 114 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 SNORA4.1-201ENST00000364263 144 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 RNU6-657P-201ENST00000383904 107 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 AL136133.1-201ENST00000413694 376 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 MTATP6P27-201ENST00000416987 621 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 AC092473.1-201ENST00000441098 221 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.66□□□□□ -2.3
HMGN1P05114 AC104058.1-201ENST00000448028 297 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.66□□□□□ -2.3
HMGN1P05114 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGN1P05114 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.66□□□□□ -2.3
HMGN1P05114 VN1R107P-201ENST00000601784 209 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 AC004908.3-201ENST00000610248 625 ntBASIC0.66□□□□□ -2.3
HMGN1P05114 AC100821.1-201ENST00000523153 2479 ntBASIC0.65□□□□□ -2.3
HMGN1P05114 Y_RNA.99-201ENST00000363138 105 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 RNU6-1080P-201ENST00000383982 107 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 RNU6-482P-201ENST00000391068 107 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AL133475.1-201ENST00000404414 305 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 BTF3L4P3-201ENST00000418879 476 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 FTH1P12-201ENST00000432137 551 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.65□□□□□ -2.31
HMGN1P05114 VN1R10P-201ENST00000447106 875 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 HMGN2P9-201ENST00000476875 229 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 RNU6-703P-201ENST00000516946 107 ntBASIC0.65□□□□□ -2.31
HMGN1P05114 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.65□□□□□ -2.31
HMGN1P05114 CYCSP23-201ENST00000519781 313 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms