Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 RPL36AP53-201ENST00000432891 316 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL591212.2-201ENST00000433923 257 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL353572.1-201ENST00000442490 417 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.73□□□□□ -1.97
RAF1P04049 AC074344.1-201ENST00000512823 224 ntBASIC2.73□□□□□ -1.97
RAF1P04049 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.73□□□□□ -1.97
RAF1P04049 SNORD60.2-201ENST00000516883 86 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 HMGN2P15-201ENST00000585707 270 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AC010525.2-201ENST00000590920 195 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL670379.4-201ENST00000605279 254 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AL359547.2-201ENST00000615810 418 ntBASIC2.73□□□□□ -1.97
RAF1P04049 uc_338.11-201ENST00000619132 160 ntBASIC2.73□□□□□ -1.97
RAF1P04049 DUXAP9-208ENST00000622815 614 ntBASIC2.73□□□□□ -1.97
RAF1P04049 AC099506.2-201ENST00000623074 221 ntBASIC2.73□□□□□ -1.97
RAF1P04049 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.73□□□□□ -1.97
RAF1P04049 AC099654.14-201ENST00000638599 341 ntBASIC2.73□□□□□ -1.97
RAF1P04049 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.73□□□□□ -1.97
RAF1P04049 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RAF1P04049 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.72□□□□□ -1.97
RAF1P04049 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 NACAP2-201ENST00000318548 624 ntBASIC2.72□□□□□ -1.97
RAF1P04049 MIR449A-201ENST00000362113 91 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RNU4-20P-201ENST00000365601 151 ntBASIC2.72□□□□□ -1.97
RAF1P04049 CISD1P1-201ENST00000393907 327 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RNU2-68P-201ENST00000410878 191 ntBASIC2.72□□□□□ -1.97
RAF1P04049 OR6C66P-201ENST00000414917 930 ntBASIC2.72□□□□□ -1.97
RAF1P04049 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.72□□□□□ -1.97
RAF1P04049 MTCO3P18-201ENST00000440206 761 ntBASIC2.72□□□□□ -1.97
RAF1P04049 CALM1P1-201ENST00000442082 433 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RPS24P13-201ENST00000442520 397 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RPL26P9-201ENST00000457466 433 ntBASIC2.72□□□□□ -1.97
RAF1P04049 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.72□□□□□ -1.97
RAF1P04049 RNU7-180P-201ENST00000459240 63 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RNU7-23P-201ENST00000459465 62 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RPS29P12-201ENST00000460178 152 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RPS29P20-201ENST00000489592 171 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RPL39P36-201ENST00000490784 156 ntBASIC2.72□□□□□ -1.97
RAF1P04049 MTCO3P9-201ENST00000506989 781 ntBASIC2.72□□□□□ -1.97
RAF1P04049 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.72□□□□□ -1.97
RAF1P04049 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.72□□□□□ -1.97
RAF1P04049 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.72□□□□□ -1.97
RAF1P04049 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
RAF1P04049 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
RAF1P04049 AC009812.2-201ENST00000517657 457 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RANP3-201ENST00000530970 276 ntBASIC2.72□□□□□ -1.97
RAF1P04049 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.72□□□□□ -1.97
RAF1P04049 MIR4424-201ENST00000585257 86 ntBASIC2.72□□□□□ -1.97
RAF1P04049 AC060780.3-201ENST00000589464 80 ntBASIC2.72□□□□□ -1.97
RAF1P04049 NRBF2P5-201ENST00000603087 788 ntBASIC2.72□□□□□ -1.97
RAF1P04049 MIR15A-201ENST00000607334 83 ntBASIC2.72□□□□□ -1.97
RAF1P04049 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.72□□□□□ -1.97
RAF1P04049 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.72□□□□□ -1.97
RAF1P04049 AC110079.1-202ENST00000635213 138 ntBASIC2.72□□□□□ -1.97
RAF1P04049 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RAF1P04049 CASC19-280ENST00000642102 1351 ntBASIC2.72□□□□□ -1.97
RAF1P04049 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.72□□□□□ -1.97
RAF1P04049 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.71□□□□□ -1.97
RAF1P04049 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.97
RAF1P04049 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RAF1P04049 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
RAF1P04049 Y_RNA.534-201ENST00000384599 112 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RPL21P75-201ENST00000396599 483 ntBASIC2.71□□□□□ -1.98
RAF1P04049 MIR888-201ENST00000401186 77 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RPL21P28-201ENST00000401418 483 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AL592114.1-201ENST00000403842 483 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RNU6-193P-201ENST00000410977 107 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AL139413.1-201ENST00000421309 217 ntBASIC2.71□□□□□ -1.98
RAF1P04049 HMGN2P30-201ENST00000423237 256 ntBASIC2.71□□□□□ -1.98
RAF1P04049 CALM2P2-201ENST00000428512 440 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AL592045.1-201ENST00000429867 352 ntBASIC2.71□□□□□ -1.98
RAF1P04049 MTND3P16-201ENST00000452205 344 ntBASIC2.71□□□□□ -1.98
RAF1P04049 FABP5P15-201ENST00000453566 214 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.71□□□□□ -1.98
RAF1P04049 SNRPFP3-201ENST00000457792 225 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RPL21P39-201ENST00000463605 483 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RPL21P93-201ENST00000480465 489 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AC087190.1-201ENST00000484462 480 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AC093591.1-201ENST00000491435 481 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RPL21P16-201ENST00000495531 483 ntBASIC2.71□□□□□ -1.98
RAF1P04049 SUMO2P6-201ENST00000505273 288 ntBASIC2.71□□□□□ -1.98
RAF1P04049 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RAF1P04049 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.71□□□□□ -1.98
RAF1P04049 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
RAF1P04049 RNA5SP356-201ENST00000515972 94 ntBASIC2.71□□□□□ -1.98
RAF1P04049 RNU6-914P-201ENST00000516749 109 ntBASIC2.71□□□□□ -1.98
RAF1P04049 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.71□□□□□ -1.98
RAF1P04049 AF235103.2-201ENST00000525753 346 ntBASIC2.71□□□□□ -1.98
RAF1P04049 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RAF1P04049 AC118273.2-201ENST00000532092 465 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms