Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNU6-14P-201ENST00000384630 106 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 SNORA26.8-201ENST00000391306 124 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHRNA1P02708 U3.37-201ENST00000408528 213 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 Y_RNA.598-201ENST00000410480 95 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.35□□□□□ -2.03
CHRNA1P02708 PTGES3P4-201ENST00000426243 356 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AL589872.1-201ENST00000426602 288 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.35□□□□□ -2.03
CHRNA1P02708 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.35□□□□□ -2.03
CHRNA1P02708 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.35□□□□□ -2.03
CHRNA1P02708 AP000889.2-201ENST00000532684 490 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.35□□□□□ -2.03
CHRNA1P02708 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHRNA1P02708 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.35□□□□□ -2.03
CHRNA1P02708 AC174048.1-201ENST00000603389 144 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.35□□□□□ -2.03
CHRNA1P02708 AC138749.5-201ENST00000611461 208 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AC116165.2-201ENST00000616705 206 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 Z99571.1-201ENST00000636677 394 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.35□□□□□ -2.03
CHRNA1P02708 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHRNA1P02708 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.35□□□□□ -2.03
CHRNA1P02708 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.34□□□□□ -2.03
CHRNA1P02708 TEX21P-201ENST00000447107 1476 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RNU5E-6P-201ENST00000365574 115 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RNU6-190P-201ENST00000384154 102 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CHRNA1P02708 CYCSP46-201ENST00000423569 204 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC007283.2-201ENST00000424739 197 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.34□□□□□ -2.03
CHRNA1P02708 USP9YP15-201ENST00000442391 422 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 BRK1P2-201ENST00000442875 223 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AL118520.1-201ENST00000450770 291 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RPL38P4-201ENST00000502376 214 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 FABP5P5-201ENST00000515537 406 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RNU6-991P-201ENST00000516168 107 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RNA5SP337-201ENST00000517007 109 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC060788.1-201ENST00000521318 469 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.34□□□□□ -2.03
CHRNA1P02708 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.34□□□□□ -2.03
CHRNA1P02708 PRELID2P1-201ENST00000552837 301 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 RPL21P5-201ENST00000554662 472 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
CHRNA1P02708 MIR4765-201ENST00000585007 77 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC009977.1-201ENST00000586015 570 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC005261.5-201ENST00000596280 355 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 BNIP3P8-201ENST00000597863 560 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.34□□□□□ -2.03
CHRNA1P02708 AC103710.2-201ENST00000609912 942 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 uc_338.14-201ENST00000613162 166 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC092140.2-201ENST00000618027 521 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 AC025048.6-202ENST00000627667 438 ntBASIC2.34□□□□□ -2.03
CHRNA1P02708 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CHRNA1P02708 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CHRNA1P02708 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
CHRNA1P02708 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHRNA1P02708 RNU6-188P-201ENST00000364207 107 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 SMIM11P1-201ENST00000369586 178 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.33□□□□□ -2.04
CHRNA1P02708 ELOCP4-201ENST00000420090 333 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.33□□□□□ -2.04
CHRNA1P02708 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.33□□□□□ -2.04
CHRNA1P02708 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
CHRNA1P02708 SNRPGP9-201ENST00000456025 225 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 HMGN2P23-201ENST00000456759 269 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AL121769.1-201ENST00000469473 401 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.33□□□□□ -2.04
CHRNA1P02708 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.33□□□□□ -2.04
CHRNA1P02708 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.33□□□□□ -2.04
CHRNA1P02708 RNU6-1183P-201ENST00000517054 60 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 SCARNA3-201ENST00000517097 143 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
CHRNA1P02708 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.33□□□□□ -2.04
CHRNA1P02708 AC084851.1-201ENST00000529105 249 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AP003122.4-201ENST00000530980 758 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC087241.2-201ENST00000535801 324 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.33□□□□□ -2.04
CHRNA1P02708 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.33□□□□□ -2.04
CHRNA1P02708 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.33□□□□□ -2.04
CHRNA1P02708 AC008088.1-201ENST00000580993 280 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.33□□□□□ -2.04
CHRNA1P02708 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC022893.3-201ENST00000607665 437 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC010678.1-201ENST00000614118 713 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 AC008250.2-201ENST00000615261 205 ntBASIC2.33□□□□□ -2.04
CHRNA1P02708 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHRNA1P02708 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHRNA1P02708 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
CHRNA1P02708 HSPE1P11-201ENST00000339579 310 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 SNORD56.2-201ENST00000363242 71 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 RNU6-960P-201ENST00000364056 120 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 RNY4P34-201ENST00000364779 95 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHRNA1P02708 RNY3P10-201ENST00000384764 102 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 MIR218-1-201ENST00000384999 110 ntBASIC2.32□□□□□ -2.04
CHRNA1P02708 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms