Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.74□□□□□ -1.81
CDKL5O76039 AC007938.3-201ENST00000604965 623 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 HMGN2P28-201ENST00000606102 262 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 MIR6128-201ENST00000615528 109 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 AC010378.1-201ENST00000619270 362 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 AC006065.5-201ENST00000623427 349 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.74□□□□□ -1.81
CDKL5O76039 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CDKL5O76039 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDKL5O76039 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6-1115P-201ENST00000362490 106 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6-1040P-201ENST00000383974 107 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6-76P-201ENST00000384060 104 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AL160275.3-201ENST00000423876 471 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.73□□□□□ -1.81
CDKL5O76039 AL591704.1-201ENST00000432574 275 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RPL23AP22-201ENST00000437556 453 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.73□□□□□ -1.81
CDKL5O76039 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.73□□□□□ -1.81
CDKL5O76039 AC091179.1-201ENST00000461606 579 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.73□□□□□ -1.81
CDKL5O76039 AC009901.1-201ENST00000506703 541 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.73□□□□□ -1.81
CDKL5O76039 SNORA31.3-201ENST00000516029 96 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU1-143P-201ENST00000516296 146 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNA5SP380-201ENST00000517190 98 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RN7SKP289-201ENST00000517244 295 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RN7SKP295-201ENST00000517264 153 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6-988P-201ENST00000519081 107 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU6-323P-201ENST00000521915 107 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.73□□□□□ -1.81
CDKL5O76039 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.73□□□□□ -1.81
CDKL5O76039 MIR2682-201ENST00000580305 110 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AC100830.2-201ENST00000581636 240 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.73□□□□□ -1.81
CDKL5O76039 U1.23-201ENST00000610293 146 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 uc_338.25-201ENST00000613756 156 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 RNU1-68P-201ENST00000615382 146 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 U1.39-201ENST00000621562 146 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 AC022418.1-201ENST00000624118 445 ntBASIC3.73□□□□□ -1.81
CDKL5O76039 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CDKL5O76039 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDKL5O76039 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDKL5O76039 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDKL5O76039 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDKL5O76039 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDKL5O76039 Y_RNA.5-201ENST00000362334 102 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 Y_RNA.133-201ENST00000363428 110 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 RNU6-593P-201ENST00000364716 112 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 RNU6-1105P-201ENST00000384774 107 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 MIR7-3-201ENST00000384898 110 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 MIR670-201ENST00000390142 98 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.72□□□□□ -1.81
CDKL5O76039 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.72□□□□□ -1.81
CDKL5O76039 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.72□□□□□ -1.81
CDKL5O76039 RPL23AP69-201ENST00000431134 458 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AL591212.2-201ENST00000433923 257 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.72□□□□□ -1.81
CDKL5O76039 AC125238.1-201ENST00000448842 249 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 MTND5P22-201ENST00000458380 195 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.72□□□□□ -1.81
CDKL5O76039 AC116337.1-201ENST00000509680 687 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 Y_RNA.720-201ENST00000517166 92 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 RNU4-60P-201ENST00000517239 135 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AL355836.1-201ENST00000555951 870 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AC107294.3-201ENST00000609211 526 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AC133104.2-201ENST00000615272 193 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 MIR7975-201ENST00000619350 68 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 AC091925.1-201ENST00000623204 462 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.72□□□□□ -1.81
CDKL5O76039 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CDKL5O76039 AC093908.1-201ENST00000623125 8092 ntBASIC3.72□□□□□ -1.81
CDKL5O76039 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDKL5O76039 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.81
CDKL5O76039 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.71□□□□□ -1.82
CDKL5O76039 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.71□□□□□ -1.82
CDKL5O76039 RNU6-1303P-201ENST00000364841 107 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 DYNLT3P1-201ENST00000378574 347 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 RNU6-128P-201ENST00000383976 107 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 RNU6-890P-201ENST00000384121 107 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 RNU6-574P-201ENST00000384265 107 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 U3.19-201ENST00000390893 196 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 RNU6-817P-201ENST00000391083 104 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.71□□□□□ -1.82
CDKL5O76039 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.71□□□□□ -1.82
CDKL5O76039 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.71□□□□□ -1.82
CDKL5O76039 AC063979.1-201ENST00000415539 377 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.71□□□□□ -1.82
CDKL5O76039 AL358176.2-201ENST00000425769 204 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 AC079780.1-201ENST00000428259 207 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 RPL26P6-201ENST00000440913 438 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 AL121871.1-201ENST00000443413 436 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 PRDX3P3-201ENST00000447765 522 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.71□□□□□ -1.82
CDKL5O76039 RPL7P42-201ENST00000481005 679 ntBASIC3.71□□□□□ -1.82
CDKL5O76039 AC006483.1-201ENST00000487308 313 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms