Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3□□□□□ -1.93
LDB3O75112 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
LDB3O75112 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
LDB3O75112 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
LDB3O75112 AC006111.3-201ENST00000622137 383 ntBASIC3□□□□□ -1.93
LDB3O75112 AC244517.12-201ENST00000623581 663 ntBASIC3□□□□□ -1.93
LDB3O75112 AC073476.4-201ENST00000628409 72 ntBASIC3□□□□□ -1.93
LDB3O75112 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDB3O75112 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
LDB3O75112 TPTE2P4-201ENST00000258589 1605 ntBASIC3□□□□□ -1.93
LDB3O75112 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LDB3O75112 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB3O75112 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB3O75112 RNU6-254P-201ENST00000363377 107 ntBASIC2.99□□□□□ -1.93
LDB3O75112 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB3O75112 SNORA22B-201ENST00000383876 138 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RNA5SP219-201ENST00000390940 113 ntBASIC2.99□□□□□ -1.93
LDB3O75112 SNORA16.2-201ENST00000390991 127 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RN7SKP158-201ENST00000410453 326 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RNU4-46P-201ENST00000410818 138 ntBASIC2.99□□□□□ -1.93
LDB3O75112 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LDB3O75112 BX682237.1-201ENST00000415016 335 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC113618.1-201ENST00000416747 285 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AL591212.2-201ENST00000433923 257 ntBASIC2.99□□□□□ -1.93
LDB3O75112 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC009237.8-201ENST00000445492 379 ntBASIC2.99□□□□□ -1.93
LDB3O75112 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB3O75112 Y_RNA.635-201ENST00000459041 101 ntBASIC2.99□□□□□ -1.93
LDB3O75112 Y_RNA.631-201ENST00000459607 101 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RPL21P8-201ENST00000465083 535 ntBASIC2.99□□□□□ -1.93
LDB3O75112 DYNLL1P5-201ENST00000467158 270 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC109925.1-201ENST00000478069 331 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RPL30P14-201ENST00000482744 348 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB3O75112 MTCO1P29-201ENST00000496868 288 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB3O75112 RN7SKP24-201ENST00000515888 284 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RNU6-1137P-201ENST00000517073 99 ntBASIC2.99□□□□□ -1.93
LDB3O75112 RNA5SP454-201ENST00000517231 127 ntBASIC2.99□□□□□ -1.93
LDB3O75112 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB3O75112 CASP1P1-201ENST00000526345 212 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.99□□□□□ -1.93
LDB3O75112 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.99□□□□□ -1.93
LDB3O75112 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB3O75112 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.99□□□□□ -1.93
LDB3O75112 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.99□□□□□ -1.93
LDB3O75112 MIR4790-201ENST00000577799 79 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AL670379.4-201ENST00000605279 254 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC096577.2-201ENST00000611455 153 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC027309.3-201ENST00000623419 351 ntBASIC2.99□□□□□ -1.93
LDB3O75112 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.99□□□□□ -1.93
LDB3O75112 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB3O75112 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB3O75112 HSPA8P4-201ENST00000511877 1920 ntBASIC2.99□□□□□ -1.93
LDB3O75112 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDB3O75112 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB3O75112 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB3O75112 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.98□□□□□ -1.93
LDB3O75112 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 UBE2L2-201ENST00000254302 429 ntBASIC2.98□□□□□ -1.93
LDB3O75112 SNORD56.3-201ENST00000363507 71 ntBASIC2.98□□□□□ -1.93
LDB3O75112 Y_RNA.212-201ENST00000364177 102 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.98□□□□□ -1.93
LDB3O75112 SNORA33.2-201ENST00000365413 134 ntBASIC2.98□□□□□ -1.93
LDB3O75112 Y_RNA.445-201ENST00000384168 102 ntBASIC2.98□□□□□ -1.93
LDB3O75112 Y_RNA.473-201ENST00000384333 102 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNU6-1160P-201ENST00000384546 104 ntBASIC2.98□□□□□ -1.93
LDB3O75112 MTCYBP4-201ENST00000401524 249 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AL139039.1-201ENST00000401900 692 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AL139397.2-201ENST00000404529 772 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AC080125.1-201ENST00000414888 684 ntBASIC2.98□□□□□ -1.93
LDB3O75112 Z85995.1-201ENST00000415547 335 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.98□□□□□ -1.93
LDB3O75112 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.98□□□□□ -1.93
LDB3O75112 RPL23AP22-201ENST00000437556 453 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.98□□□□□ -1.93
LDB3O75112 RN7SL863P-201ENST00000462370 296 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AC087884.1-201ENST00000469738 328 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RN7SL807P-201ENST00000470923 297 ntBASIC2.98□□□□□ -1.93
LDB3O75112 HMGN2P13-201ENST00000476476 274 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AL160314.1-201ENST00000490836 438 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RN7SL504P-201ENST00000494496 287 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 AC093303.1-201ENST00000514549 295 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNU6-1170P-201ENST00000515974 106 ntBASIC2.98□□□□□ -1.93
LDB3O75112 SNORA64.4-201ENST00000516632 81 ntBASIC2.98□□□□□ -1.93
LDB3O75112 RNU6-256P-201ENST00000516747 97 ntBASIC2.98□□□□□ -1.93
LDB3O75112 MIR3186-201ENST00000577404 85 ntBASIC2.98□□□□□ -1.93
LDB3O75112 AL138889.2-201ENST00000603883 242 ntBASIC2.98□□□□□ -1.93
LDB3O75112 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.98□□□□□ -1.93
LDB3O75112 AC107294.1-201ENST00000609524 467 ntBASIC2.98□□□□□ -1.93
LDB3O75112 uc_338.22-201ENST00000622722 187 ntBASIC2.98□□□□□ -1.93
LDB3O75112 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
LDB3O75112 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LDB3O75112 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms