Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 HIGD1AP13-201ENST00000509878 289 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.76□□□□□ -1.97
PRKNO60260 FAM206BP-201ENST00000510179 541 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.76□□□□□ -1.97
PRKNO60260 AC104136.1-201ENST00000512969 394 ntBASIC2.76□□□□□ -1.97
PRKNO60260 RNA5SP165-201ENST00000517142 115 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 AC087241.2-201ENST00000535801 324 ntBASIC2.76□□□□□ -1.97
PRKNO60260 H3F3AP1-201ENST00000559984 334 ntBASIC2.76□□□□□ -1.97
PRKNO60260 MIR1273C-201ENST00000578669 77 ntBASIC2.76□□□□□ -1.97
PRKNO60260 MIR5692A1-201ENST00000580523 69 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 AC091135.1-201ENST00000585943 307 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC073539.2-201ENST00000597113 165 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC136601.2-201ENST00000604356 474 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AL033523.1-201ENST00000605153 153 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC004805.2-201ENST00000605382 482 ntBASIC2.76□□□□□ -1.97
PRKNO60260 Z82243.1-201ENST00000609432 473 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC069234.5-201ENST00000611056 416 ntBASIC2.76□□□□□ -1.97
PRKNO60260 AC135507.2-201ENST00000612443 309 ntBASIC2.76□□□□□ -1.97
PRKNO60260 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.76□□□□□ -1.97
PRKNO60260 AL137790.1-201ENST00000634283 177 ntBASIC2.76□□□□□ -1.97
PRKNO60260 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRKNO60260 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PRKNO60260 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PRKNO60260 AC103988.1-201ENST00000566382 2177 ntBASIC2.76□□□□□ -1.97
PRKNO60260 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PRKNO60260 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 Y_RNA.33-201ENST00000362591 102 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-1252P-201ENST00000363054 104 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-1303P-201ENST00000364841 107 ntBASIC2.75□□□□□ -1.97
PRKNO60260 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-831P-201ENST00000384548 107 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-140P-201ENST00000384566 108 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-510P-201ENST00000391239 108 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU6-1025P-201ENST00000410629 104 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AL592148.1-201ENST00000413568 445 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 PDCL2P1-201ENST00000419302 352 ntBASIC2.75□□□□□ -1.97
PRKNO60260 ZNF863P-201ENST00000426746 417 ntBASIC2.75□□□□□ -1.97
PRKNO60260 TRIAP1P1-201ENST00000427062 225 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AL139132.1-201ENST00000431587 344 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC125238.1-201ENST00000448842 249 ntBASIC2.75□□□□□ -1.97
PRKNO60260 RNU7-167P-201ENST00000459160 62 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC022493.1-201ENST00000492984 337 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC139453.3-201ENST00000493276 369 ntBASIC2.75□□□□□ -1.97
PRKNO60260 MTND3P25-201ENST00000509243 135 ntBASIC2.75□□□□□ -1.97
PRKNO60260 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.75□□□□□ -1.97
PRKNO60260 RNU7-30P-201ENST00000516835 62 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AP003122.3-201ENST00000526316 255 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC022690.1-201ENST00000526681 550 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC084851.1-201ENST00000529105 249 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.75□□□□□ -1.97
PRKNO60260 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
PRKNO60260 AC090115.3-201ENST00000553218 849 ntBASIC2.75□□□□□ -1.97
PRKNO60260 SCOCP1-201ENST00000554676 349 ntBASIC2.75□□□□□ -1.97
PRKNO60260 EIF4BP1-201ENST00000554881 351 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.75□□□□□ -1.97
PRKNO60260 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.75□□□□□ -1.97
PRKNO60260 MIR4742-201ENST00000581069 85 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.75□□□□□ -1.97
PRKNO60260 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.75□□□□□ -1.97
PRKNO60260 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.75□□□□□ -1.97
PRKNO60260 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC027309.3-201ENST00000623419 351 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC022418.1-201ENST00000624118 445 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC006386.2-201ENST00000624491 75 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AC012005.1-201ENST00000624575 75 ntBASIC2.75□□□□□ -1.97
PRKNO60260 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.75□□□□□ -1.97
PRKNO60260 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.75□□□□□ -1.97
PRKNO60260 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PRKNO60260 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.75□□□□□ -1.97
PRKNO60260 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.75□□□□□ -1.97
PRKNO60260 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PRKNO60260 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AC090740.1-201ENST00000623193 2262 ntBASIC2.74□□□□□ -1.97
PRKNO60260 FTLP6-201ENST00000355274 422 ntBASIC2.74□□□□□ -1.97
PRKNO60260 Y_RNA.142-201ENST00000363491 102 ntBASIC2.74□□□□□ -1.97
PRKNO60260 U3.12-201ENST00000364498 214 ntBASIC2.74□□□□□ -1.97
PRKNO60260 SNORD81.2-201ENST00000365153 76 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RNU6-395P-201ENST00000365662 106 ntBASIC2.74□□□□□ -1.97
PRKNO60260 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PRKNO60260 Y_RNA.399-201ENST00000383955 105 ntBASIC2.74□□□□□ -1.97
PRKNO60260 SNORA75B-201ENST00000384053 137 ntBASIC2.74□□□□□ -1.97
PRKNO60260 Y_RNA.530-201ENST00000384587 101 ntBASIC2.74□□□□□ -1.97
PRKNO60260 RNU6-1179P-201ENST00000384667 107 ntBASIC2.74□□□□□ -1.97
PRKNO60260 SNORA46-201ENST00000384762 135 ntBASIC2.74□□□□□ -1.97
PRKNO60260 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PRKNO60260 FAT1P1-201ENST00000406588 507 ntBASIC2.74□□□□□ -1.97
PRKNO60260 EEF1A1P41-201ENST00000414667 207 ntBASIC2.74□□□□□ -1.97
PRKNO60260 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.74□□□□□ -1.97
PRKNO60260 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.74□□□□□ -1.97
PRKNO60260 AC092047.1-201ENST00000424997 240 ntBASIC2.74□□□□□ -1.97
PRKNO60260 MTCO3P46-201ENST00000425787 232 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms