Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL512643.1-201ENST00000635735 524 ntBASIC1.48□□□□□ -2.17
SGCEO43556 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SGCEO43556 RNU6-1010P-201ENST00000362757 107 ntBASIC1.47□□□□□ -2.17
SGCEO43556 SNORA40C-201ENST00000391285 128 ntBASIC1.47□□□□□ -2.17
SGCEO43556 FTH1P15-201ENST00000406984 280 ntBASIC1.47□□□□□ -2.17
SGCEO43556 MIR1305-201ENST00000408300 86 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC069282.1-201ENST00000411911 526 ntBASIC1.47□□□□□ -2.17
SGCEO43556 RAC1P6-201ENST00000423911 575 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC008267.5-201ENST00000424928 265 ntBASIC1.47□□□□□ -2.17
SGCEO43556 RPS25P9-201ENST00000435591 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC104058.1-201ENST00000448028 297 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC003071.1-201ENST00000451219 789 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.47□□□□□ -2.17
SGCEO43556 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
SGCEO43556 snoU13.15-201ENST00000459407 104 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.47□□□□□ -2.17
SGCEO43556 RNU2-53P-201ENST00000516257 147 ntBASIC1.47□□□□□ -2.17
SGCEO43556 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
SGCEO43556 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
SGCEO43556 MTCYBP23-201ENST00000558717 1102 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC011494.1-201ENST00000596454 237 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.6-201ENST00000603753 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.11-201ENST00000604059 253 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC008162.1-201ENST00000604718 254 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.1-201ENST00000604752 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.5-201ENST00000605253 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.12-201ENST00000605291 253 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.8-201ENST00000605353 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AL670379.7-201ENST00000605823 252 ntBASIC1.47□□□□□ -2.17
SGCEO43556 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
SGCEO43556 RNU6-88P-201ENST00000606801 100 ntBASIC1.47□□□□□ -2.17
SGCEO43556 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
SGCEO43556 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
SGCEO43556 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
SGCEO43556 MIR3529-201ENST00000637713 78 ntBASIC1.47□□□□□ -2.17
SGCEO43556 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
SGCEO43556 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.47□□□□□ -2.17
SGCEO43556 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.47□□□□□ -2.17
SGCEO43556 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.47□□□□□ -2.17
SGCEO43556 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SGCEO43556 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
SGCEO43556 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SGCEO43556 RNU6-1257P-201ENST00000384625 110 ntBASIC1.46□□□□□ -2.18
SGCEO43556 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SGCEO43556 RNU11-3P-201ENST00000391111 133 ntBASIC1.46□□□□□ -2.18
SGCEO43556 RN7SKP51-201ENST00000410781 304 ntBASIC1.46□□□□□ -2.18
SGCEO43556 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.46□□□□□ -2.18
SGCEO43556 AL022400.1-201ENST00000423946 935 ntBASIC1.46□□□□□ -2.18
SGCEO43556 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.46□□□□□ -2.18
SGCEO43556 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.46□□□□□ -2.18
SGCEO43556 AL591704.1-201ENST00000432574 275 ntBASIC1.46□□□□□ -2.18
SGCEO43556 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.46□□□□□ -2.18
SGCEO43556 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.46□□□□□ -2.18
SGCEO43556 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.46□□□□□ -2.18
SGCEO43556 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
SGCEO43556 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 FAM92A1P2-202ENST00000504766 877 ntBASIC1.46□□□□□ -2.18
SGCEO43556 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.46□□□□□ -2.18
SGCEO43556 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.46□□□□□ -2.18
SGCEO43556 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SGCEO43556 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
SGCEO43556 uc_338.15-201ENST00000615470 191 ntBASIC1.46□□□□□ -2.18
SGCEO43556 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.46□□□□□ -2.18
SGCEO43556 AC002543.1-201ENST00000299783 1954 ntBASIC1.46□□□□□ -2.18
SGCEO43556 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SGCEO43556 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.45□□□□□ -2.18
SGCEO43556 RNU6-858P-201ENST00000362436 107 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.45□□□□□ -2.18
SGCEO43556 RNU6-546P-201ENST00000383991 107 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC068050.1-201ENST00000394891 380 ntBASIC1.45□□□□□ -2.18
SGCEO43556 RN7SKP284-201ENST00000411002 343 ntBASIC1.45□□□□□ -2.18
SGCEO43556 RNU2-32P-201ENST00000411193 191 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.45□□□□□ -2.18
SGCEO43556 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.45□□□□□ -2.18
SGCEO43556 snoU13.26-201ENST00000459452 105 ntBASIC1.45□□□□□ -2.18
SGCEO43556 RPS3AP22-201ENST00000488297 769 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC021146.2-201ENST00000504736 556 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC116337.1-201ENST00000509680 687 ntBASIC1.45□□□□□ -2.18
SGCEO43556 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
SGCEO43556 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.45□□□□□ -2.18
SGCEO43556 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.45□□□□□ -2.18
SGCEO43556 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.45□□□□□ -2.18
SGCEO43556 AC093249.1-201ENST00000567049 203 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC007363.1-201ENST00000604736 620 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC093788.1-201ENST00000609356 927 ntBASIC1.45□□□□□ -2.18
SGCEO43556 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC091834.1-201ENST00000614543 472 ntBASIC1.45□□□□□ -2.18
SGCEO43556 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.45□□□□□ -2.18
SGCEO43556 FRG1KP-201ENST00000623592 341 ntBASIC1.45□□□□□ -2.18
SGCEO43556 AC092656.1-203ENST00000624134 423 ntBASIC1.45□□□□□ -2.18
SGCEO43556 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.44□□□□□ -2.18
SGCEO43556 RNU6-529P-201ENST00000363383 104 ntBASIC1.44□□□□□ -2.18
SGCEO43556 RNU6-166P-201ENST00000384371 107 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms