Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC093151.1-201ENST00000427711 313 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN1O15353 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN1O15353 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN1O15353 RPS24P13-201ENST00000442520 397 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 GSTA11P-201ENST00000452866 669 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 HMGN2P7-201ENST00000456186 273 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AC104564.1-201ENST00000493028 407 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AC008526.1-201ENST00000509149 338 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
FOXN1O15353 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN1O15353 AC113195.1-201ENST00000579952 141 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXN1O15353 AC098826.3-201ENST00000603823 466 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AL034351.1-201ENST00000605288 668 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AC011890.2-201ENST00000613393 294 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 AL138726.1-201ENST00000614873 333 ntBASIC3.89□□□□□ -1.79
FOXN1O15353 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXN1O15353 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN1O15353 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXN1O15353 AL356489.2-201ENST00000566968 3528 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN1O15353 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.88□□□□□ -1.79
FOXN1O15353 RNU6-188P-201ENST00000364207 107 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 Y_RNA.473-201ENST00000384333 102 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 SNORA24.1-201ENST00000384401 135 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 RNU4-61P-201ENST00000411243 107 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 RPL7P10-201ENST00000417407 739 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 RPL7P46-201ENST00000425129 740 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXN1O15353 BX679664.1-201ENST00000434429 253 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN1O15353 RPS24P6-201ENST00000452670 400 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN1O15353 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN1O15353 AC010401.1-201ENST00000463867 348 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 RPL7P47-201ENST00000497299 556 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 RN7SKP132-201ENST00000516001 208 ntBASIC3.88□□□□□ -1.79
FOXN1O15353 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN1O15353 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN1O15353 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN1O15353 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN1O15353 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXN1O15353 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN1O15353 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN1O15353 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
FOXN1O15353 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
FOXN1O15353 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN1O15353 AC062016.1-201ENST00000355719 319 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-1287P-201ENST00000362914 107 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-99P-201ENST00000364721 107 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-61P-201ENST00000365528 109 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN1O15353 Y_RNA.404-201ENST00000383978 102 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 Y_RNA.512-201ENST00000384518 102 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-1060P-201ENST00000384664 107 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 MIR450B-201ENST00000401182 78 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AL136372.1-201ENST00000403060 228 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-55P-201ENST00000411092 107 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AC069218.2-201ENST00000411665 344 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RPS15AP40-201ENST00000419621 391 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN1O15353 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN1O15353 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXN1O15353 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 Y_RNA.668-201ENST00000516233 93 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 RNU6-699P-201ENST00000517081 110 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 FAM60DP-201ENST00000524174 632 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXN1O15353 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN1O15353 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.87□□□□□ -1.79
FOXN1O15353 AC004696.1-201ENST00000614345 607 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 MIR6128-201ENST00000615528 109 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 PISRT1.1-201ENST00000616930 107 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 U2.1-201ENST00000618978 145 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AC103705.1-201ENST00000619013 241 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AC010378.1-201ENST00000619270 362 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.87□□□□□ -1.79
FOXN1O15353 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN1O15353 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN1O15353 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN1O15353 ZNF33CP-201ENST00000432492 2030 ntBASIC3.87□□□□□ -1.79
FOXN1O15353 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN1O15353 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN1O15353 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN1O15353 FAM35BP-202ENST00000497389 3337 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
FOXN1O15353 SNORD3E-201ENST00000362899 217 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 Y_RNA.80-201ENST00000362996 102 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNU6-593P-201ENST00000364716 112 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNU5E-6P-201ENST00000365574 115 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 Y_RNA.556-201ENST00000384677 113 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNA5SP219-201ENST00000390940 113 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 MIR548I3-201ENST00000408378 149 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 MIR548I1-201ENST00000408810 149 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 MIR1183-201ENST00000408856 89 ntBASIC3.86□□□□□ -1.79
FOXN1O15353 Z99755.1-201ENST00000414048 380 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms