Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PCMTD1P7-201ENST00000634506 357 ntBASIC1.59□□□□□ -2.15
CHD2O14647 NACAP2-201ENST00000318548 624 ntBASIC1.59□□□□□ -2.16
CHD2O14647 RNU1-72P-201ENST00000362976 153 ntBASIC1.59□□□□□ -2.16
CHD2O14647 RNU6-97P-201ENST00000363387 104 ntBASIC1.59□□□□□ -2.16
CHD2O14647 ERHP2-201ENST00000402323 299 ntBASIC1.59□□□□□ -2.16
CHD2O14647 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.59□□□□□ -2.16
CHD2O14647 SNRPEP10-201ENST00000420249 274 ntBASIC1.59□□□□□ -2.16
CHD2O14647 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.59□□□□□ -2.16
CHD2O14647 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.59□□□□□ -2.16
CHD2O14647 AC013267.1-201ENST00000458227 267 ntBASIC1.59□□□□□ -2.16
CHD2O14647 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.59□□□□□ -2.16
CHD2O14647 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CHD2O14647 MRPS33P3-201ENST00000513456 322 ntBASIC1.59□□□□□ -2.16
CHD2O14647 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.59□□□□□ -2.16
CHD2O14647 LINC00933-203ENST00000559812 219 ntBASIC1.59□□□□□ -2.16
CHD2O14647 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.59□□□□□ -2.16
CHD2O14647 AC104763.3-201ENST00000613765 618 ntBASIC1.59□□□□□ -2.16
CHD2O14647 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.59□□□□□ -2.16
CHD2O14647 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
CHD2O14647 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CHD2O14647 RNU6-1280P-201ENST00000365211 107 ntBASIC1.58□□□□□ -2.16
CHD2O14647 Y_RNA.408-201ENST00000383987 102 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD2O14647 MTCO2P1-201ENST00000424648 477 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD2O14647 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.58□□□□□ -2.16
CHD2O14647 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CHD2O14647 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.58□□□□□ -2.16
CHD2O14647 AC114981.1-201ENST00000503897 678 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD2O14647 AC098591.2-201ENST00000510152 315 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD2O14647 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.58□□□□□ -2.16
CHD2O14647 RPL21P5-201ENST00000554662 472 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AL359212.1-201ENST00000556608 614 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AC068620.3-201ENST00000602749 560 ntBASIC1.58□□□□□ -2.16
CHD2O14647 AL021368.1-201ENST00000607490 540 ntBASIC1.58□□□□□ -2.16
CHD2O14647 DUSP12P1-201ENST00000612874 516 ntBASIC1.58□□□□□ -2.16
CHD2O14647 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.58□□□□□ -2.16
CHD2O14647 LINC02211-204ENST00000642024 1070 ntBASIC1.58□□□□□ -2.16
CHD2O14647 SNORD56-201ENST00000413522 71 ntBASIC1.57□□□□□ -2.16
CHD2O14647 AL356379.1-201ENST00000414105 126 ntBASIC1.57□□□□□ -2.16
CHD2O14647 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD2O14647 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD2O14647 MTCO2P25-201ENST00000447065 681 ntBASIC1.57□□□□□ -2.16
CHD2O14647 PSPHP1-201ENST00000450062 261 ntBASIC1.57□□□□□ -2.16
CHD2O14647 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.57□□□□□ -2.16
CHD2O14647 AL121769.1-201ENST00000469473 401 ntBASIC1.57□□□□□ -2.16
CHD2O14647 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.57□□□□□ -2.16
CHD2O14647 AL121821.2-201ENST00000556081 394 ntBASIC1.57□□□□□ -2.16
CHD2O14647 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHD2O14647 CIR1P3-201ENST00000405137 479 ntBASIC1.56□□□□□ -2.16
CHD2O14647 RNU2-49P-201ENST00000410666 184 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC068533.2-201ENST00000411872 306 ntBASIC1.56□□□□□ -2.16
CHD2O14647 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD2O14647 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD2O14647 AC112771.1-201ENST00000463581 102 ntBASIC1.56□□□□□ -2.16
CHD2O14647 KLF3P2-201ENST00000465138 268 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 RNA5SP384-201ENST00000516615 116 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 CYCSP2-201ENST00000558168 301 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AL132657.2-201ENST00000564417 358 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 AL109918.3-201ENST00000603072 338 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AL512506.1-201ENST00000613918 449 ntBASIC1.56□□□□□ -2.16
CHD2O14647 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD2O14647 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CHD2O14647 SNORA46.1-201ENST00000391069 153 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AL603865.2-201ENST00000401679 213 ntBASIC1.56□□□□□ -2.16
CHD2O14647 UBE2FP1-201ENST00000416536 447 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD2O14647 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD2O14647 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.56□□□□□ -2.16
CHD2O14647 PAXBP1P1-201ENST00000449315 447 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.56□□□□□ -2.16
CHD2O14647 MEMO1P3-201ENST00000459811 302 ntBASIC1.56□□□□□ -2.16
CHD2O14647 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 AC093809.1-201ENST00000509155 340 ntBASIC1.56□□□□□ -2.16
CHD2O14647 RNU6-581P-201ENST00000516214 105 ntBASIC1.56□□□□□ -2.16
CHD2O14647 RNU6-1225P-201ENST00000516336 65 ntBASIC1.56□□□□□ -2.16
CHD2O14647 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.56□□□□□ -2.16
CHD2O14647 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.56□□□□□ -2.16
CHD2O14647 AC026271.5-201ENST00000577873 130 ntBASIC1.56□□□□□ -2.16
CHD2O14647 BNIP3P23-201ENST00000599655 511 ntBASIC1.56□□□□□ -2.16
CHD2O14647 MTCYBP22-201ENST00000603788 447 ntBASIC1.56□□□□□ -2.16
CHD2O14647 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.56□□□□□ -2.16
CHD2O14647 AC008555.8-201ENST00000623602 2168 ntBASIC1.55□□□□□ -2.16
CHD2O14647 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHD2O14647 U3.13-201ENST00000364804 214 ntBASIC1.55□□□□□ -2.16
CHD2O14647 SNORA40C-201ENST00000391285 128 ntBASIC1.55□□□□□ -2.16
CHD2O14647 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.55□□□□□ -2.16
CHD2O14647 AC127391.1-201ENST00000411737 98 ntBASIC1.55□□□□□ -2.16
CHD2O14647 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD2O14647 ISCA1P1-201ENST00000426679 387 ntBASIC1.55□□□□□ -2.16
CHD2O14647 GPM6BP2-201ENST00000432046 144 ntBASIC1.55□□□□□ -2.16
CHD2O14647 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.55□□□□□ -2.16
CHD2O14647 GPM6BP1-201ENST00000446387 144 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms