Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CCT4P2-201ENST00000233836 1548 ntBASIC2.66□□□□□ -1.98
CUX2O14529 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
CUX2O14529 AC135776.4-201ENST00000624300 1904 ntBASIC2.66□□□□□ -1.98
CUX2O14529 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CUX2O14529 Y_RNA.245-201ENST00000364493 95 ntBASIC2.65□□□□□ -1.98
CUX2O14529 USP9YP26-201ENST00000421008 661 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.65□□□□□ -1.98
CUX2O14529 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.65□□□□□ -1.98
CUX2O14529 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.65□□□□□ -1.98
CUX2O14529 AC090096.1-201ENST00000489168 390 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.65□□□□□ -1.98
CUX2O14529 RNA5SP82-201ENST00000516707 92 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.65□□□□□ -1.98
CUX2O14529 MTCO1P47-201ENST00000523889 1271 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC023050.2-201ENST00000544968 387 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC080078.3-201ENST00000605407 463 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AP000240.1-201ENST00000609910 452 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.65□□□□□ -1.98
CUX2O14529 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.65□□□□□ -1.98
CUX2O14529 AL031667.3-201ENST00000620124 655 ntBASIC2.65□□□□□ -1.98
CUX2O14529 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.65□□□□□ -1.98
CUX2O14529 AC103710.2-202ENST00000641454 2853 ntBASIC2.65□□□□□ -1.99
CUX2O14529 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.65□□□□□ -1.99
CUX2O14529 RNY4P24-201ENST00000362735 96 ntBASIC2.65□□□□□ -1.99
CUX2O14529 RNU6-884P-201ENST00000363889 107 ntBASIC2.65□□□□□ -1.99
CUX2O14529 RNU2-33P-201ENST00000410344 192 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AL513185.2-201ENST00000425543 193 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC244035.1-201ENST00000430042 390 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC009296.1-201ENST00000443146 155 ntBASIC2.65□□□□□ -1.99
CUX2O14529 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.65□□□□□ -1.99
CUX2O14529 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.65□□□□□ -1.99
CUX2O14529 RPL37P6-201ENST00000460682 294 ntBASIC2.65□□□□□ -1.99
CUX2O14529 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CUX2O14529 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CUX2O14529 HSPE1P23-201ENST00000509838 286 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.65□□□□□ -1.99
CUX2O14529 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CUX2O14529 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.65□□□□□ -1.99
CUX2O14529 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.65□□□□□ -1.99
CUX2O14529 AC109446.2-201ENST00000567872 497 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.65□□□□□ -1.99
CUX2O14529 AC112187.2-201ENST00000604345 283 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC107214.2-201ENST00000608204 634 ntBASIC2.65□□□□□ -1.99
CUX2O14529 AC090970.3-201ENST00000612566 866 ntBASIC2.65□□□□□ -1.99
CUX2O14529 MTND4P16-201ENST00000466108 1367 ntBASIC2.64□□□□□ -1.99
CUX2O14529 RNA5SP492-201ENST00000411330 114 ntBASIC2.64□□□□□ -1.99
CUX2O14529 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.64□□□□□ -1.99
CUX2O14529 RPL22P18-201ENST00000417197 377 ntBASIC2.64□□□□□ -1.99
CUX2O14529 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.64□□□□□ -1.99
CUX2O14529 UBE2FP3-201ENST00000436366 524 ntBASIC2.64□□□□□ -1.99
CUX2O14529 RSU1P2-202ENST00000437884 485 ntBASIC2.64□□□□□ -1.99
CUX2O14529 MTCYBP3-201ENST00000445588 1137 ntBASIC2.64□□□□□ -1.99
CUX2O14529 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 RPL23AP41-201ENST00000484754 458 ntBASIC2.64□□□□□ -1.99
CUX2O14529 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.64□□□□□ -1.99
CUX2O14529 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 DEFB108A-201ENST00000530110 222 ntBASIC2.64□□□□□ -1.99
CUX2O14529 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.64□□□□□ -1.99
CUX2O14529 AGGF1P5-201ENST00000567900 919 ntBASIC2.64□□□□□ -1.99
CUX2O14529 MIR3618-201ENST00000580330 88 ntBASIC2.64□□□□□ -1.99
CUX2O14529 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.64□□□□□ -1.99
CUX2O14529 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.64□□□□□ -1.99
CUX2O14529 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.63□□□□□ -1.99
CUX2O14529 ZNF519P1-201ENST00000449011 1626 ntBASIC2.63□□□□□ -1.99
CUX2O14529 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CUX2O14529 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CUX2O14529 SNORD113-6-201ENST00000363345 75 ntBASIC2.63□□□□□ -1.99
CUX2O14529 RNU6-769P-201ENST00000384407 104 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.63□□□□□ -1.99
CUX2O14529 MTCYBP39-201ENST00000437562 491 ntBASIC2.63□□□□□ -1.99
CUX2O14529 MTND1P18-201ENST00000448191 573 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC108059.3-201ENST00000456388 214 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC087588.1-201ENST00000462203 316 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC114786.4-201ENST00000508771 728 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC114797.1-201ENST00000514003 728 ntBASIC2.63□□□□□ -1.99
CUX2O14529 SNORA3.4-201ENST00000515969 96 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.63□□□□□ -1.99
CUX2O14529 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.63□□□□□ -1.99
CUX2O14529 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.63□□□□□ -1.99
CUX2O14529 HMGN2P15-201ENST00000585707 270 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC007490.1-201ENST00000624321 703 ntBASIC2.63□□□□□ -1.99
CUX2O14529 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.63□□□□□ -1.99
CUX2O14529 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
CUX2O14529 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.62□□□□□ -1.99
CUX2O14529 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CUX2O14529 RNU6-1214P-201ENST00000363650 109 ntBASIC2.62□□□□□ -1.99
CUX2O14529 Y_RNA.302-201ENST00000364997 102 ntBASIC2.62□□□□□ -1.99
CUX2O14529 RNA5SP363-201ENST00000365072 115 ntBASIC2.62□□□□□ -1.99
CUX2O14529 RNU1-109P-201ENST00000383960 147 ntBASIC2.62□□□□□ -1.99
CUX2O14529 MIR888-201ENST00000401186 77 ntBASIC2.62□□□□□ -1.99
CUX2O14529 FO393413.1-201ENST00000402892 195 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.62□□□□□ -1.99
CUX2O14529 HMGN2P38-201ENST00000423806 265 ntBASIC2.62□□□□□ -1.99
CUX2O14529 RPL37P21-201ENST00000435890 276 ntBASIC2.62□□□□□ -1.99
CUX2O14529 COX6CP14-201ENST00000469580 174 ntBASIC2.62□□□□□ -1.99
CUX2O14529 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms