Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC108729.1-201ENST00000487812 947 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 BOLA3P3-201ENST00000505182 232 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 SNORA25.11-201ENST00000515935 105 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 CYP2C61P-201ENST00000604072 290 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC011374.2-201ENST00000607135 526 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AP005229.2-201ENST00000609980 697 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 MIR8065-201ENST00000620577 100 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC009033.1-201ENST00000624279 431 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 OR4G3P-201ENST00000633500 913 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC009950.2-201ENST00000636548 183 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 AC092125.1-201ENST00000562568 1995 ntBASIC0.24□□□□□ -2.37
CPSF4LA6NMK7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 SNORD14D-201ENST00000384390 87 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MIR605-201ENST00000385078 83 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RNU2-33P-201ENST00000410344 192 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RNU2-47P-201ENST00000410649 186 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC092634.6-201ENST00000418558 192 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 SKA2P1-201ENST00000425592 390 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 FO393419.3-201ENST00000428741 282 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC068135.1-201ENST00000446164 246 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MTND5P8-201ENST00000449817 1083 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MEMO1P3-201ENST00000459811 302 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RPL21P47-201ENST00000483696 477 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC093767.1-201ENST00000504523 156 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC104806.1-201ENST00000508720 308 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC022483.1-201ENST00000514020 567 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 RNU4-54P-201ENST00000516428 129 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 ROCK1P1-201ENST00000573767 549 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MIR4711-201ENST00000578274 70 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 MIR3937-201ENST00000580135 106 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC008751.2-201ENST00000597885 980 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 BBIP1P1-201ENST00000602999 279 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AL671309.1-201ENST00000603750 544 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AP000860.1-201ENST00000605250 559 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 NDUFA8P1-201ENST00000605525 367 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 AC095038.3-201ENST00000634439 195 ntBASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.23□□□□□ -2.37
CPSF4LA6NMK7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 MIR19B1-201ENST00000384829 87 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 BEND7P1-201ENST00000422058 457 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 OR2AQ1P-201ENST00000451972 200 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 RPL22P13-201ENST00000493291 347 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 RNA5SP121-201ENST00000516537 101 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 CYCSP23-201ENST00000519781 313 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AL132857.1-201ENST00000555180 708 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AC090079.2-201ENST00000575289 768 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 BNIP3P16-201ENST00000589779 534 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AC117490.2-201ENST00000610042 594 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 MIR3199-2-201ENST00000636243 86 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 U2.21-201ENST00000637295 81 ntBASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CPSF4LA6NMK7 AC027514.1-201ENST00000588561 1603 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 SNORD33-201ENST00000362761 85 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 RPL23AP32-201ENST00000395315 459 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 MIR936-201ENST00000401264 98 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 FTH1P15-201ENST00000406984 280 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 NDUFS5P4-201ENST00000412983 318 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 MTCYBP32-201ENST00000427945 1084 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 RFC5P1-201ENST00000454419 874 ntBASIC0.21□□□□□ -2.38
CPSF4LA6NMK7 COX6CP6-201ENST00000490840 228 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms