Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SNORA51-201ENST00000606420 132 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 RNVU1-4-201ENST00000612985 164 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 AC083806.3-201ENST00000614016 455 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 AL049641.1-201ENST00000441055 1948 ntBASIC3.62□□□□□ -1.83
CCDC78A2IDD5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.158-201ENST00000363651 101 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RNU6-596P-201ENST00000365395 98 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RNU6-1032P-201ENST00000384100 107 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 MIR578-201ENST00000384828 96 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.594-201ENST00000410373 140 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 USMG5P1-201ENST00000425964 177 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 SNORA25.10-201ENST00000515926 124 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RN7SKP295-201ENST00000517264 153 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AC025423.5-201ENST00000550230 219 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL161798.1-201ENST00000604630 131 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL161423.1-201ENST00000613700 262 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AC068831.7-201ENST00000616954 363 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL512643.1-201ENST00000635735 524 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 AL732372.2-225ENST00000642124 456 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 CUL1P1-201ENST00000509510 2425 ntBASIC3.61□□□□□ -1.83
CCDC78A2IDD5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC78A2IDD5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.5-201ENST00000362334 102 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.31-201ENST00000362574 102 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 SNORD46.1-201ENST00000364139 104 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RNU6-890P-201ENST00000384121 107 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 SNORA41-201ENST00000384675 132 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 SNORA11.1-201ENST00000408133 129 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RPS15AP6-201ENST00000420703 385 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC236972.1-201ENST00000433225 199 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 SNRPEP4-201ENST00000435815 279 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RPS24P13-201ENST00000442520 397 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RPL7P49-201ENST00000471402 708 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RPL7P42-201ENST00000481005 679 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RNU1-95P-201ENST00000516357 160 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 RNU1-128P-201ENST00000516704 160 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC009229.3-201ENST00000608056 282 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC011890.2-201ENST00000613393 294 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AC090132.2-201ENST00000615881 347 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL034408.1-202ENST00000636088 415 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 Z99571.1-201ENST00000636677 394 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC78A2IDD5 AL359693.1-201ENST00000614959 2407 ntBASIC3.6□□□□□ -1.83
CCDC78A2IDD5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 MIR412-201ENST00000362142 91 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 SNORA63.1-201ENST00000362493 131 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 SNORD9-201ENST00000362566 104 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.80-201ENST00000362996 102 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.144-201ENST00000363521 113 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 SNORA5A-201ENST00000384111 134 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 Y_RNA.459-201ENST00000384251 102 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 RNU2-3P-201ENST00000410144 191 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 RNU6-1304P-201ENST00000411374 106 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC78A2IDD5 CYCSP33-201ENST00000414485 327 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 Z85995.1-201ENST00000415547 335 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 AL590632.1-201ENST00000424289 371 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 AL592045.1-201ENST00000429867 352 ntBASIC3.59□□□□□ -1.83
CCDC78A2IDD5 GPM6BP2-201ENST00000432046 144 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms