Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-85P-201ENST00000605989 107 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AL591516.1-201ENST00000611326 274 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC019176.2-201ENST00000611579 315 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR6075-201ENST00000620782 95 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 MTND5P19-201ENST00000424872 1794 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 KPNA2P1-201ENST00000458289 1591 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC007390.2-201ENST00000606229 3803 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.216-201ENST00000364205 93 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP189-201ENST00000364920 115 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.324-201ENST00000365165 102 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP167-201ENST00000365461 116 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-741P-201ENST00000383889 107 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU2-3P-201ENST00000410144 191 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU2-33P-201ENST00000410344 192 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-1050P-201ENST00000410388 107 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-1025P-201ENST00000410629 104 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.646-201ENST00000410980 101 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 CYCSP33-201ENST00000414485 327 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RPS15AP6-201ENST00000420703 385 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 HMGB1P9-201ENST00000429856 646 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 NDUFS5P3-201ENST00000450668 321 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AL645939.1-201ENST00000453429 797 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 FABP5P15-201ENST00000453566 214 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RPL21P129-201ENST00000491732 478 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC097473.1-201ENST00000508142 408 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC026782.1-201ENST00000512952 449 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AP003122.3-201ENST00000526316 255 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC084851.1-201ENST00000529105 249 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 OR1M4P-201ENST00000589199 287 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AC106900.2-201ENST00000604994 317 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 AL162730.1-201ENST00000605734 292 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 uc_338.22-201ENST00000622722 187 ntBASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TCRBV5S1A1TA0A578 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC073325.2-201ENST00000339545 159 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-600P-201ENST00000362524 99 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 SNORA33.2-201ENST00000365413 134 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-1329P-201ENST00000365664 107 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP171-201ENST00000391071 115 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU4-47P-201ENST00000410876 114 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP120-201ENST00000410900 112 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 UBE2D3P2-201ENST00000424409 445 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 VDAC1P3-201ENST00000434069 851 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC009237.8-201ENST00000445492 379 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 SMURF2P1-201ENST00000514992 481 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC018462.2-201ENST00000605375 395 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AP000654.2-201ENST00000605633 586 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AL355802.3-201ENST00000607571 545 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC040896.1-201ENST00000613819 479 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TCRBV5S1A1TA0A578 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 SNORA75B-201ENST00000384053 137 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RNU6-738P-201ENST00000384531 106 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 MIR670-201ENST00000390142 98 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 Y_RNA.594-201ENST00000410373 140 ntBASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.27□□□□□ -1.89
TCRBV5S1A1TA0A578 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms