Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MIR5187-201ENST00000583479 76 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AC040896.1-201ENST00000613819 479 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AL138721.1-201ENST00000616756 179 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 U6.105-201ENST00000637379 88 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AL049781.1-201ENST00000623195 3585 ntBASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC163A0A0D9SF12 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 Y_RNA.31-201ENST00000362574 102 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 SNORD35B-201ENST00000363660 87 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 Y_RNA.162-201ENST00000363683 102 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-1040P-201ENST00000383974 107 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 RPS29P4-201ENST00000414733 161 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 CYCSP32-201ENST00000440548 321 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 AC012308.1-201ENST00000451232 178 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 AC006026.2-201ENST00000457376 180 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 RPL23AP14-201ENST00000468281 468 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 AC022493.2-201ENST00000506122 481 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 SNORA43.2-201ENST00000516652 128 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-307P-201ENST00000516743 106 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MIR3200-201ENST00000580767 85 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MIR5195-201ENST00000583555 115 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MIR432-201ENST00000606207 94 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MIR7975-201ENST00000619350 68 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MIR3199-2-201ENST00000636243 86 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 U4.7-201ENST00000638126 106 ntBASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC163A0A0D9SF12 AC010733.2-201ENST00000589496 5702 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-198P-201ENST00000384258 104 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 MIR518D-201ENST00000385014 87 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 SNORA75.6-201ENST00000391318 127 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 SNORA11.2-201ENST00000408318 127 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 BX276092.3-201ENST00000424182 230 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AL591043.1-201ENST00000432461 424 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 DAP3P1-201ENST00000441522 278 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 RN7SL293P-201ENST00000481765 281 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AL163540.1-201ENST00000485382 386 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC096576.1-201ENST00000489014 359 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 MTND4LP22-201ENST00000508209 276 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC074250.1-201ENST00000511117 192 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 SMURF2P1-201ENST00000514992 481 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-470P-201ENST00000515954 104 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AP005902.1-201ENST00000521358 186 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 MTCO3P13-201ENST00000577757 781 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC005899.2-201ENST00000584353 90 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 BNIP3P16-201ENST00000589779 534 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 SNRPGP17-201ENST00000603780 214 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 uc_338.22-201ENST00000622722 187 ntBASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC163A0A0D9SF12 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC007656.2-201ENST00000624902 4547 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 RNA5SP399-201ENST00000364003 117 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 Y_RNA.202-201ENST00000364083 110 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-336P-201ENST00000364891 107 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 SNORD116-20-201ENST00000384529 92 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC096664.2-201ENST00000411843 406 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AL035423.1-201ENST00000420331 213 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 BPY2DP-201ENST00000422208 265 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 RPL21P40-201ENST00000428586 483 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC124916.1-201ENST00000444020 547 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 RPL21P23-201ENST00000446654 460 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AL031183.1-201ENST00000457667 207 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 RNU6-612P-201ENST00000516909 102 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 ELOCP31-201ENST00000540463 467 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC022432.1-201ENST00000595739 310 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC078795.3-201ENST00000602913 472 ntBASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC163A0A0D9SF12 MIR6134-201ENST00000617606 109 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms