Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 NCOR1P3-201ENST00000420479 303 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 MTCO3P1-205ENST00000422088 832 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC139712.2-201ENST00000424302 339 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC027119.1-201ENST00000440877 241 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AP001025.1-201ENST00000486139 332 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC005840.1-201ENST00000498412 377 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 CENPUP1-201ENST00000526649 1202 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 VN1R107P-201ENST00000601784 209 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 FAM71BP1-201ENST00000604431 523 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AL355472.4-201ENST00000610233 626 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 AL133216.2-202ENST00000634512 349 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 HAUS6P2-201ENST00000433254 2404 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-1080P-201ENST00000383982 107 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-26P-201ENST00000383985 107 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-637P-201ENST00000384050 107 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 SRIP3-201ENST00000413200 219 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 RPS15AP12-201ENST00000419498 388 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 USP9YP26-201ENST00000421008 661 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 MTND4P24-201ENST00000424002 397 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 USP9YP18-201ENST00000425912 695 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 USP9YP17-201ENST00000444617 696 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC026410.2-201ENST00000460281 156 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC021382.1-201ENST00000483523 359 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC109927.2-201ENST00000506416 303 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 UBL5P1-201ENST00000507979 193 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC008628.1-201ENST00000508663 265 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 RN7SKP265-201ENST00000516448 223 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORA31.16-201ENST00000516773 139 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC012414.2-201ENST00000559474 187 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC00557-201ENST00000563184 1279 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR6857-201ENST00000613267 93 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 AC006213.5-201ENST00000619673 288 ntBASIC0.6□□□□□ -2.31
TRAV12-3A0A0B4J271 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 NACAP2-201ENST00000318548 624 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORA18.2-201ENST00000383865 132 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR1267-201ENST00000408723 78 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 PRPS1P1-201ENST00000445305 876 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 TOMM22P6-201ENST00000465035 409 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AC087477.1-201ENST00000465747 340 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RPL7P43-201ENST00000478876 753 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AC108729.1-201ENST00000487812 947 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010460.2-201ENST00000509054 677 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-351P-201ENST00000516097 100 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-927P-201ENST00000516199 100 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 ACA59.2-201ENST00000517061 156 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AP000907.2-201ENST00000530827 353 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RPL30P11-203ENST00000598995 310 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AL139344.1-201ENST00000605228 195 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AC004492.1-201ENST00000607036 742 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AL355802.4-201ENST00000607635 548 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-91P-201ENST00000607774 107 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 AC012676.2-201ENST00000619258 186 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
TRAV12-3A0A0B4J271 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 RNU1-124P-201ENST00000363861 145 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 Y_RNA.338-201ENST00000365320 114 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 SNORD51.1-201ENST00000365405 77 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 RNU2-32P-201ENST00000411193 191 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 RPS4XP11-201ENST00000446897 772 ntBASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV12-3A0A0B4J271 MTND2P6-201ENST00000455337 1030 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms