Protein–RNA interactions for Protein: Q9Y5W8

SNX13, Sorting nexin-13, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13Q9Y5W8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SNX13Q9Y5W8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.34□□□□□ -1.88
SNX13Q9Y5W8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SNX13Q9Y5W8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.34□□□□□ -1.88
SNX13Q9Y5W8 AC007823.1-201ENST00000569932 1566 ntBASIC3.34□□□□□ -1.88
SNX13Q9Y5W8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RNA5SP283-201ENST00000365604 119 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 SNORD116-11-201ENST00000383882 92 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RNU6-214P-201ENST00000384130 107 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 MIR30B-201ENST00000384850 88 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RNA5SP354-201ENST00000391247 136 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 PPP1R2P5-201ENST00000457256 603 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC006026.2-201ENST00000457376 180 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC092436.3-201ENST00000511788 257 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RAC1P5-201ENST00000512182 576 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 CR383656.8-201ENST00000549046 145 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC007151.1-201ENST00000572774 483 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL670379.10-201ENST00000604330 253 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 ELOCP5-201ENST00000604924 333 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL670379.9-201ENST00000605428 253 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC009994.1-201ENST00000606889 253 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AP003355.3-201ENST00000623465 114 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 MTND4P12-201ENST00000498999 1377 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AL079305.1-201ENST00000623159 3008 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 AC004944.1-201ENST00000517807 3059 ntBASIC3.33□□□□□ -1.88
SNX13Q9Y5W8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 RPL32P3-201ENST00000359025 275 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 RNU5E-4P-201ENST00000364931 120 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 SNORA62-201ENST00000365493 153 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 MIR937-201ENST00000401271 86 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 UBE2V1P4-201ENST00000425374 344 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AMD1P1-201ENST00000457220 922 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC093663.1-201ENST00000497190 394 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC008526.1-201ENST00000509149 338 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 RN7SKP122-201ENST00000515923 296 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 RNU6-566P-201ENST00000516790 107 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 CYCSP30-201ENST00000546447 172 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC026371.1-201ENST00000551867 419 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC091135.1-201ENST00000585943 307 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC064836.2-201ENST00000609491 462 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 uc_338.5-201ENST00000611839 155 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX13Q9Y5W8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 Y_RNA.70-201ENST00000362886 110 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 AL356432.1-201ENST00000405809 419 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 PTGES3P4-201ENST00000426243 356 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 AL365400.1-201ENST00000431854 640 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 MRPL50P4-201ENST00000446432 475 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 AL031274.1-201ENST00000450334 232 ntBASIC3.31□□□□□ -1.88
SNX13Q9Y5W8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms