Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SNORA63-201ENST00000363450 132 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 RN7SKP15-201ENST00000364742 309 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 Y_RNA.395-201ENST00000383945 109 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AL354751.2-201ENST00000415471 210 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC083863.1-201ENST00000438811 231 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 Y_RNA.631-201ENST00000459607 101 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 FO393415.2-201ENST00000480085 343 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL17P19-201ENST00000489069 552 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 TRBV12-2-201ENST00000489763 344 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC016632.1-201ENST00000503994 196 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC023442.1-201ENST00000531247 422 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC007375.1-201ENST00000554513 578 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AL353621.2-201ENST00000605340 133 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC100827.5-201ENST00000615883 426 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 AC140479.6-201ENST00000633535 357 ntBASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 MTND5P30-201ENST00000452896 1731 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 Y_RNA.445-201ENST00000384168 102 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC096664.2-201ENST00000411843 406 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC005154.2-201ENST00000438110 379 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL031659.1-201ENST00000447075 539 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL513124.1-201ENST00000450410 614 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC104109.1-201ENST00000498563 436 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC022493.2-201ENST00000506122 481 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 RN7SKP122-201ENST00000515923 296 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-1153P-201ENST00000516760 105 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC009318.2-201ENST00000610917 651 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 MIR6853-201ENST00000619642 74 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 AC125257.1-201ENST00000560400 2930 ntBASIC5.32□□□□□ -1.56
GTF3C3Q9Y5Q9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 MFSD8-236ENST00000641509 4050 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AL590240.1-201ENST00000334118 313 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-1010P-201ENST00000362757 107 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 SNORA17A-201ENST00000391185 133 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 NUP35P1-201ENST00000422734 947 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL23AP95-201ENST00000426806 265 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL23AP81-201ENST00000455252 467 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AC109327.1-201ENST00000471666 403 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 RAC1P5-201ENST00000512182 576 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AC009812.2-201ENST00000517657 457 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 SNRPGP18-201ENST00000553000 214 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 EDDM3DP-201ENST00000554692 434 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 SNORD95-201ENST00000579879 68 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 HMGB1P24-202ENST00000615653 685 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 SNORA17.5-201ENST00000630429 132 ntBASIC5.31□□□□□ -1.56
GTF3C3Q9Y5Q9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 AP003122.5-201ENST00000527668 3766 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU6-1083P-201ENST00000384022 107 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 MIR559-201ENST00000385188 96 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 U3.26-201ENST00000391236 204 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 HLFP1-201ENST00000402375 499 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 MIR548P-201ENST00000408336 84 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL30P12-201ENST00000474666 353 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 AC072052.1-201ENST00000496556 306 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 OR7H2P-201ENST00000513483 306 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 HSPE1P4-201ENST00000550617 308 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 SUB1P3-201ENST00000564581 315 ntBASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
GTF3C3Q9Y5Q9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AC092268.1-201ENST00000342691 405 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 SNORD50.1-201ENST00000362987 71 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RNY1P16-201ENST00000363063 111 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 SNORD32A-201ENST00000364805 84 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RNU2-23P-201ENST00000410545 195 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RN7SKP61-201ENST00000410642 295 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 ARF4P2-201ENST00000430209 526 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RN7SKP210-201ENST00000459176 261 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 SNRPGP7-201ENST00000469016 106 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RN7SL330P-201ENST00000469709 307 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 RPL36AP48-201ENST00000485521 314 ntBASIC5.29□□□□□ -1.56
GTF3C3Q9Y5Q9 AC022447.4-201ENST00000504053 364 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms