Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC005261.5-201ENST00000596280 355 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AL022154.1-201ENST00000604698 785 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AL670379.4-201ENST00000605279 254 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC072046.2-201ENST00000618366 268 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC093648.1-201ENST00000623546 606 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 AL390237.1-201ENST00000404226 1415 ntBASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ATG4BQ9Y4P1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.4□□□□□ -2.02
ATG4BQ9Y4P1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ATG4BQ9Y4P1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ATG4BQ9Y4P1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-61P-201ENST00000365528 109 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-19P-201ENST00000384718 107 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC133104.1-201ENST00000429100 218 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC079781.2-201ENST00000446424 169 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 Z83846.1-201ENST00000446798 265 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC080013.2-201ENST00000460866 323 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC126389.1-201ENST00000477436 290 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 RPL23AP94-201ENST00000512518 302 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 OR5AL2P-201ENST00000532185 920 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AL121821.2-201ENST00000556081 394 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 MIR3611-201ENST00000584484 83 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC109347.2-201ENST00000610220 349 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ATG4BQ9Y4P1 AC103710.2-202ENST00000641454 2853 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC080128.1-201ENST00000474389 1917 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 SNORA62.1-201ENST00000364287 154 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 Y_RNA.367-201ENST00000365544 101 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 Z98749.2-208ENST00000381646 500 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 MIR1-2-201ENST00000384961 85 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1328P-201ENST00000410938 106 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 PIGFP2-201ENST00000421400 651 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL160275.3-201ENST00000423876 471 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 MYL8P-204ENST00000431574 518 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL078601.1-201ENST00000444542 271 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL441985.1-201ENST00000457727 251 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 EIF4EP3-201ENST00000498782 656 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC008716.1-201ENST00000511084 513 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-581P-201ENST00000516214 105 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 SCARNA3-201ENST00000517097 143 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AP003072.2-201ENST00000527756 676 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC234778.2-201ENST00000566241 354 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL391840.1-201ENST00000571144 367 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC073648.5-201ENST00000603502 305 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 U6.114-201ENST00000636407 96 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AC093536.2-201ENST00000565257 1406 ntBASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
ATG4BQ9Y4P1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 MIR449A-201ENST00000362113 91 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-181P-201ENST00000363225 107 ntBASIC2.38□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP68-201ENST00000363885 119 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms