Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC096745.1-201ENST00000509945 370 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-64P-201ENST00000517119 105 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 GNAI2P1-201ENST00000541815 315 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC015712.3-201ENST00000559380 164 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MTND3P13-201ENST00000574391 343 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MIR4782-201ENST00000577987 79 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 MIR4713-201ENST00000582691 75 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL670379.10-201ENST00000604330 253 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL670379.9-201ENST00000605428 253 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC107952.2-201ENST00000606048 486 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AC103810.8-201ENST00000607347 118 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AL133445.2-201ENST00000611191 527 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 AP000943.4-201ENST00000622912 357 ntBASIC1.37□□□□□ -2.19
HDGFL3Q9Y3E1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC138393.1-203ENST00000327086 343 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-1284P-201ENST00000363701 100 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 MIR764-201ENST00000390811 85 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 MTCO1P17-201ENST00000411522 491 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 OR9R1P-201ENST00000412200 877 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 VN1R36P-201ENST00000414936 291 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC074117.2-201ENST00000417130 397 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC007098.1-201ENST00000420122 367 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 EIF4EP2-201ENST00000422816 654 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC027575.1-201ENST00000481064 460 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC093752.1-206ENST00000511823 336 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AP006587.4-201ENST00000526053 529 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AL136520.1-202ENST00000555494 763 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC104984.5-201ENST00000586878 94 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC021646.1-201ENST00000605469 484 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC006270.3-201ENST00000605967 1036 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 AC123767.1-202ENST00000620407 817 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
HDGFL3Q9Y3E1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 RNU1-17P-201ENST00000363022 152 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-560P-201ENST00000364007 108 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-60P-201ENST00000364792 103 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-898P-201ENST00000365627 104 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 RNU2-48P-201ENST00000410694 191 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC006512.1-201ENST00000468816 291 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC104629.1-201ENST00000494226 508 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 CYCSP27-201ENST00000527643 293 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC136619.2-201ENST00000563361 631 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC009977.1-201ENST00000586015 570 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 AC112220.2-201ENST00000605513 533 ntBASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.35□□□□□ -2.19
HDGFL3Q9Y3E1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RNU5E-1-201ENST00000362477 120 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 Y_RNA.110-201ENST00000363220 99 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 Y_RNA.311-201ENST00000365068 96 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RNU6-1032P-201ENST00000384100 107 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 MIR934-201ENST00000401241 83 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AL033519.2-201ENST00000403958 392 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 RN7SKP51-201ENST00000410781 304 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AL359704.1-201ENST00000411586 781 ntBASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.34□□□□□ -2.19
HDGFL3Q9Y3E1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms