Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC104237.2-201ENST00000612456 443 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 AC090582.1-201ENST00000636321 199 ntBASIC4.56□□□□□ -1.68
SHROOM4Q9ULL8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 USP9YP6-201ENST00000413550 854 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 RN7SL499P-201ENST00000481141 276 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 RNA5SP281-201ENST00000516504 135 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-1315P-201ENST00000517187 99 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 RNA5SP380-201ENST00000517190 98 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC084851.1-201ENST00000529105 249 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC021739.1-201ENST00000559631 174 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 MIR4782-201ENST00000577987 79 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC010678.1-201ENST00000614118 713 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 AC138649.3-201ENST00000622154 254 ntBASIC4.55□□□□□ -1.68
SHROOM4Q9ULL8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-179P-201ENST00000363350 107 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-108P-201ENST00000365558 107 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 SNORA24.1-201ENST00000384401 135 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-750P-201ENST00000390946 107 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AL356057.2-201ENST00000403318 432 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RNU6-387P-201ENST00000411331 105 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 MTCO2P34-201ENST00000421994 607 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AC098614.2-201ENST00000426040 255 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 SAR1AP4-201ENST00000429225 591 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RPL31P35-201ENST00000431058 377 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 SETP8-201ENST00000435341 628 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 SCARNA24.1-201ENST00000516465 137 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AC021269.2-201ENST00000532318 330 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 AC002064.3-201ENST00000623448 346 ntBASIC4.54□□□□□ -1.68
SHROOM4Q9ULL8 RNA5SP456-201ENST00000364002 114 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 Y_RNA.338-201ENST00000365320 114 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 U8.13-201ENST00000390842 128 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 RNA5SP111-201ENST00000411386 101 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AC096649.2-201ENST00000416186 393 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 MTCO1P19-201ENST00000443487 500 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 FAM35CP-201ENST00000554755 2470 ntBASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.53□□□□□ -1.68
SHROOM4Q9ULL8 MTND5P17-201ENST00000418405 1603 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC103710.2-202ENST00000641454 2853 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 OSTCP8-201ENST00000445117 448 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 SEM1P1-201ENST00000506694 209 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC026436.1-201ENST00000510537 270 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-1220P-201ENST00000517126 108 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 LINC00933-203ENST00000559812 219 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AL391840.1-201ENST00000571144 367 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC024619.4-201ENST00000580924 316 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 AC068790.2-201ENST00000602601 557 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 Z84480.1-201ENST00000605131 311 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 U6.42-201ENST00000618440 107 ntBASIC4.52□□□□□ -1.69
SHROOM4Q9ULL8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-1025P-201ENST00000410629 104 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC092809.3-201ENST00000415453 231 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 MORF4L1P6-201ENST00000418771 268 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 CALM2P2-201ENST00000428512 440 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 HMGN2P10-201ENST00000448085 265 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC022364.2-201ENST00000457963 554 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-572P-201ENST00000516724 80 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 MTCO2P4-201ENST00000517968 247 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AL157871.3-201ENST00000557231 293 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AL845331.3-202ENST00000562856 261 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC006566.1-201ENST00000608943 513 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC024940.5-201ENST00000622889 474 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms