Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 TRBV1-201ENST00000476502 284 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC096576.1-201ENST00000489014 359 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 RNU6-559P-201ENST00000516151 98 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 RNU1-143P-201ENST00000516296 146 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC245166.1-201ENST00000521012 253 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC090115.3-201ENST00000553218 849 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 APOOP1-201ENST00000604695 592 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AL158032.1-201ENST00000605401 106 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 AL133215.3-201ENST00000609801 448 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 U1.23-201ENST00000610293 146 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 RNU1-68P-201ENST00000615382 146 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC090971.5-201ENST00000621102 293 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 U1.39-201ENST00000621562 146 ntBASIC3.86□□□□□ -1.79
USP25Q9UHP3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP25Q9UHP3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP25Q9UHP3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USP25Q9UHP3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP25Q9UHP3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.86□□□□□ -1.79
USP25Q9UHP3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP25Q9UHP3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP25Q9UHP3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNU6-254P-201ENST00000363377 107 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNU6-43P-201ENST00000384302 107 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 MIR301A-201ENST00000385261 86 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNA5SP252-201ENST00000391131 119 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 MIR548F5-201ENST00000408421 86 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNA5SP44-201ENST00000410446 133 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNU2-68P-201ENST00000410878 191 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC092809.3-201ENST00000415453 231 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC099548.1-201ENST00000421443 426 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AL592045.1-201ENST00000429867 352 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AL591704.1-201ENST00000432574 275 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 AL358232.1-201ENST00000448030 501 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC107399.1-201ENST00000451226 265 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 RBMY2UP-201ENST00000453474 324 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 snoU13.22-201ENST00000459428 104 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RPL7P43-201ENST00000478876 753 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RPS15AP34-201ENST00000487776 387 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 RNA5SP165-201ENST00000517142 115 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 AP000763.2-201ENST00000540641 163 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC023043.2-201ENST00000589678 1026 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 AC008739.3-201ENST00000603262 127 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.85□□□□□ -1.79
USP25Q9UHP3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP25Q9UHP3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.85□□□□□ -1.79
USP25Q9UHP3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP25Q9UHP3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP25Q9UHP3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP25Q9UHP3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 SNORA14A-201ENST00000364773 135 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 MIR200C-201ENST00000384980 68 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 RNY4P36-201ENST00000391116 96 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC074085.1-201ENST00000413598 418 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 Z99755.1-201ENST00000414048 380 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 BX682237.1-201ENST00000415016 335 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 RPL12P25-201ENST00000455592 494 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AL031183.1-201ENST00000457667 207 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC092798.1-201ENST00000458542 409 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 DYNLL1P5-201ENST00000467158 270 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC092185.1-201ENST00000491371 97 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 RNU6-256P-201ENST00000516747 97 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 RNU6-914P-201ENST00000516749 109 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 RNU6-566P-201ENST00000516790 107 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.84□□□□□ -1.79
USP25Q9UHP3 MIR3672-201ENST00000584290 82 ntBASIC3.84□□□□□ -1.79
USP25Q9UHP3 AC099506.2-201ENST00000623074 221 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms