Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 RNU6-1035P-201ENST00000384477 107 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 MIR506-201ENST00000384998 124 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 PGBD4P5-201ENST00000445958 426 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 AC034114.1-201ENST00000520293 285 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 MIR548Y-201ENST00000582739 110 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 AL669831.4-202ENST00000590817 238 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 MTCO2P2-201ENST00000591258 225 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 ZNF680P1-201ENST00000436625 1469 ntBASIC0.36□□□□□ -2.35
CCDC180Q9P1Z9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 RNA5SP327-201ENST00000362494 101 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC007742.1-201ENST00000425789 329 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 ELOCP26-201ENST00000436067 329 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC233702.2-202ENST00000562547 291 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC004492.1-201ENST00000607036 742 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC024060.1-201ENST00000607052 494 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 MIR8065-201ENST00000620577 100 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 Y_RNA.60-201ENST00000362831 98 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 UBE2V1P4-201ENST00000425374 344 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC026271.5-201ENST00000577873 130 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 AC079791.1-201ENST00000605356 973 ntBASIC0.35□□□□□ -2.35
CCDC180Q9P1Z9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 AC087588.2-201ENST00000617667 426 ntBASIC0.34□□□□□ -2.36
CCDC180Q9P1Z9 Y_RNA.493-201ENST00000384422 102 ntBASIC0.33□□□□□ -2.36
CCDC180Q9P1Z9 AC023141.4-201ENST00000412031 328 ntBASIC0.33□□□□□ -2.36
CCDC180Q9P1Z9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC180Q9P1Z9 MIR4802-201ENST00000581881 80 ntBASIC0.33□□□□□ -2.36
CCDC180Q9P1Z9 AC073569.3-201ENST00000619055 682 ntBASIC0.33□□□□□ -2.36
CCDC180Q9P1Z9 RNU6-697P-201ENST00000363348 107 ntBASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 RNU6-700P-201ENST00000391043 107 ntBASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 AC111000.5-201ENST00000506559 1178 ntBASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 AC021739.1-201ENST00000559631 174 ntBASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 MIR5093-201ENST00000583199 100 ntBASIC0.32□□□□□ -2.36
CCDC180Q9P1Z9 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 RNU6-748P-201ENST00000384648 107 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 RPL21P24-201ENST00000413752 448 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 MTND5P14-201ENST00000441481 1267 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL358794.1-201ENST00000445689 381 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 TRBVA-201ENST00000498804 316 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 HAUS1P3-201ENST00000523909 662 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AC005832.3-201ENST00000537929 631 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL021879.1-201ENST00000611756 288 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 RNU6-1083P-201ENST00000384022 107 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 MIR1265-201ENST00000408444 86 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL606489.2-201ENST00000433886 234 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AC118282.2-201ENST00000508739 374 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AC121161.1-201ENST00000510606 652 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 AL121652.1-201ENST00000608851 448 ntBASIC0.31□□□□□ -2.36
CCDC180Q9P1Z9 SNORA2A-201ENST00000383885 135 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 RNU2-36P-201ENST00000410361 191 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 RPL23AP95-201ENST00000426806 265 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 AC099654.5-201ENST00000636479 350 ntBASIC0.3□□□□□ -2.36
CCDC180Q9P1Z9 USP9YP26-201ENST00000421008 661 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 USP9YP18-201ENST00000425912 695 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 ZNF863P-201ENST00000426746 417 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 USP9YP24-201ENST00000434374 697 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 USP9YP17-201ENST00000444617 696 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 HSPE1P13-201ENST00000451143 297 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 AC114982.1-201ENST00000469402 321 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 RPS26P55-201ENST00000471178 356 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 RNF138P1-201ENST00000502765 546 ntBASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC180Q9P1Z9 AL138963.2-201ENST00000605137 226 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms