Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AP002791.1-201ENST00000623291 381 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 AL589743.1-201ENST00000551932 2712 ntBASIC1.04□□□□□ -2.24
PHRF1Q9P1Y6 NDUFS5P4-201ENST00000412983 318 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 MTCO2P5-201ENST00000422621 426 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 RPL23AP6-201ENST00000446637 472 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 VN1R10P-201ENST00000447106 875 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC079776.3-201ENST00000450665 370 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AL160314.1-201ENST00000490836 438 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 RNA5SP395-201ENST00000516567 118 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC006518.2-201ENST00000542513 940 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC133485.1-201ENST00000567176 124 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 MIR3126-201ENST00000577443 74 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC091946.2-201ENST00000606105 291 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC239868.4-201ENST00000608318 671 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AL773524.1-201ENST00000614065 229 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC002550.2-201ENST00000621246 394 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC008443.7-201ENST00000622195 246 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 AC087821.2-201ENST00000637086 450 ntBASIC1.03□□□□□ -2.24
PHRF1Q9P1Y6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 RNA5SP125-201ENST00000364843 120 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-549P-201ENST00000384433 107 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-19P-201ENST00000384718 107 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 MIR506-201ENST00000384998 124 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 MIR147B-201ENST00000390185 80 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 RPS15AP5-201ENST00000436276 388 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 FABP5P14-201ENST00000437273 393 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AL353689.1-201ENST00000438895 199 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC098831.1-201ENST00000440661 216 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 RPL26P9-201ENST00000457466 433 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC006199.1-201ENST00000548728 219 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AL391813.1-201ENST00000603098 260 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AP001485.1-201ENST00000604799 199 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC092953.2-201ENST00000608000 699 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AC024257.5-201ENST00000612739 531 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 U4atac.1-201ENST00000618345 95 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 LINC02211-204ENST00000642024 1070 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 AL359854.1-201ENST00000614203 1594 ntBASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
PHRF1Q9P1Y6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 RNU1-72P-201ENST00000362976 153 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-216P-201ENST00000363282 104 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-884P-201ENST00000363889 107 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 MIR217-201ENST00000384817 110 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 BTF3P8-201ENST00000414577 526 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 MTND1P9-201ENST00000453775 944 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC027575.1-201ENST00000481064 460 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 LARP7P2-201ENST00000575306 125 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 MIR4765-201ENST00000585007 77 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC005261.5-201ENST00000596280 355 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC025588.2-201ENST00000604851 466 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC104820.1-201ENST00000624183 307 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC079416.3-201ENST00000624479 549 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 AC110491.1-201ENST00000562191 2010 ntBASIC1.01□□□□□ -2.25
PHRF1Q9P1Y6 OR4G2P-201ENST00000328113 903 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-1078P-201ENST00000364522 103 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 SUGT1P1-201ENST00000379514 476 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RN7SKP200-201ENST00000410564 320 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 MTATP6P27-201ENST00000416987 621 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RPL39P6-201ENST00000448289 150 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL096803.2-201ENST00000450032 677 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 MRPL42P4-201ENST00000453267 443 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 DYNLL1P5-201ENST00000467158 270 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 MIR892C-201ENST00000516410 77 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC012435.1-202ENST00000568772 240 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC008121.1-201ENST00000603244 268 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 U2.21-201ENST00000637295 81 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 SNRPEP3-201ENST00000338402 276 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-223P-201ENST00000362830 107 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 VN1R36P-201ENST00000414936 291 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL161788.1-201ENST00000441805 169 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RNFT1P2-201ENST00000443064 757 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms