Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC107953.1-201ENST00000522216 297 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AL109918.3-201ENST00000603072 338 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AL160281.1-201ENST00000605307 311 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 MIR15A-201ENST00000607334 83 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC092953.2-201ENST00000608000 699 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC103710.2-201ENST00000609912 942 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC022202.1-201ENST00000613515 211 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AL031667.3-201ENST00000620124 655 ntBASIC1.75□□□□□ -2.13
CLN6Q9NWW5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLN6Q9NWW5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AP006437.1-201ENST00000641440 3685 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 SNORD114-19-201ENST00000363072 75 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 Y_RNA.97-201ENST00000363094 102 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 SNORA25B-201ENST00000365507 128 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 HMGN2P39-201ENST00000398005 273 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL512604.1-201ENST00000404812 257 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 RPS27AP14-201ENST00000422868 454 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL356320.1-201ENST00000429616 163 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 RPL37P21-201ENST00000435890 276 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL583843.1-201ENST00000456070 346 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 RPL7P43-201ENST00000478876 753 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC107934.1-201ENST00000522215 217 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 MTND1P8-201ENST00000571424 950 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC018638.7-201ENST00000605836 1114 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC093788.1-201ENST00000609356 927 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AL355816.2-201ENST00000610049 647 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC092656.1-203ENST00000624134 423 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC091932.3-201ENST00000624223 323 ntBASIC1.74□□□□□ -2.13
CLN6Q9NWW5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.74□□□□□ -2.13
CLN6Q9NWW5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 RNU6-960P-201ENST00000364056 120 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 RNU6-660P-201ENST00000364566 109 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 RNU6-1200P-201ENST00000384162 107 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 SSR1P2-201ENST00000415208 787 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AL008987.1-201ENST00000415528 237 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC016831.2-201ENST00000417179 352 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AL008629.1-201ENST00000438615 184 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 GDI2P2-201ENST00000445131 608 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 MED28P2-201ENST00000475771 317 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 MRPS17P9-201ENST00000511924 393 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 Y_RNA.689-201ENST00000516589 107 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 OR5B19P-201ENST00000531766 928 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC090888.2-201ENST00000559765 1144 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC233702.2-202ENST00000562547 291 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC136619.2-201ENST00000563361 631 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 RPL30P11-203ENST00000598995 310 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 NDUFA8P1-201ENST00000605525 367 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AC092106.3-201ENST00000611308 722 ntBASIC1.73□□□□□ -2.13
CLN6Q9NWW5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.73□□□□□ -2.13
CLN6Q9NWW5 AL445523.1-201ENST00000451184 1362 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 U3.13-201ENST00000364804 214 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 RNU6-1032P-201ENST00000384100 107 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 MIR513B-201ENST00000385136 84 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL591034.2-201ENST00000402839 359 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL023284.1-201ENST00000403956 276 ntBASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.72□□□□□ -2.13
CLN6Q9NWW5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms