Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC010975.3-201ENST00000618727 978 ntBASIC1.38□□□□□ -2.19
TRIM4Q9C037 RNU1-93P-201ENST00000364704 169 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 MIR517C-201ENST00000385103 95 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 MIR561-201ENST00000385216 97 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 RPS6P15-201ENST00000431996 751 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 MTCYBP15-201ENST00000433123 1127 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM4Q9C037 COX6CP14-201ENST00000469580 174 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC018437.1-201ENST00000492214 406 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM4Q9C037 CYB5AP5-201ENST00000549779 389 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC008121.3-201ENST00000618726 433 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC253576.2-201ENST00000618815 580 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC019226.1-201ENST00000625666 515 ntBASIC1.37□□□□□ -2.19
TRIM4Q9C037 AC091812.1-201ENST00000432235 1948 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AL591034.2-201ENST00000402839 359 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 MIR548J-201ENST00000408833 112 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 RNU2-32P-201ENST00000411193 191 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC078974.1-201ENST00000411597 223 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AL449283.1-202ENST00000418249 604 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 DEFB130D-201ENST00000426866 237 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 AP000949.1-201ENST00000438328 629 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC013267.1-201ENST00000458227 267 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC117503.1-201ENST00000472241 394 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 FAM206BP-201ENST00000510179 541 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 SNORA48.11-201ENST00000517015 89 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC012213.3-201ENST00000577199 777 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC073544.2-201ENST00000601155 540 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AP005229.2-201ENST00000609980 697 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 DUSP12P1-201ENST00000612874 516 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 MIR6788-201ENST00000618842 66 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 AC092192.1-201ENST00000633154 1018 ntBASIC1.36□□□□□ -2.19
TRIM4Q9C037 Y_RNA.393-201ENST00000383936 102 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 RNU6-1032P-201ENST00000384100 107 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 RNY1P4-201ENST00000384595 115 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 RNU6-658P-201ENST00000384606 106 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 RNU6-754P-201ENST00000391166 107 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 RPL22P22-201ENST00000395439 379 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AL365400.1-201ENST00000431854 640 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 USP9YP24-201ENST00000434374 697 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AL121601.2-201ENST00000438019 707 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC034244.1-201ENST00000507687 207 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 FABP5P5-201ENST00000515537 406 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC026271.5-201ENST00000577873 130 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 AL713866.2-201ENST00000603579 219 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AC018638.7-201ENST00000605836 1114 ntBASIC1.35□□□□□ -2.19
TRIM4Q9C037 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM4Q9C037 RNU6-343P-201ENST00000364709 104 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 RNU6-359P-201ENST00000365466 108 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRIM4Q9C037 RNU6-1105P-201ENST00000384774 107 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 UBE2V1P15-201ENST00000407776 448 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 RPL7P34-201ENST00000433316 712 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 SEPT14P24-201ENST00000447236 180 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC114981.1-201ENST00000503897 678 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM4Q9C037 RNU6-927P-201ENST00000516199 100 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 RNU6-581P-201ENST00000516214 105 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC122134.1-202ENST00000569111 1201 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AL355598.1-201ENST00000604169 202 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC016925.2-201ENST00000605108 242 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC097468.3-201ENST00000607956 456 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC092953.2-201ENST00000608000 699 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 TUG1_2.1-201ENST00000614234 87 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC009268.2-201ENST00000621925 457 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC120349.2-201ENST00000625002 298 ntBASIC1.34□□□□□ -2.19
TRIM4Q9C037 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM4Q9C037 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.33□□□□□ -2.2
TRIM4Q9C037 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM4Q9C037 RNU1-23P-201ENST00000363361 144 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 TPMTP2-201ENST00000414372 726 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 SEPT7P5-201ENST00000434048 306 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 AL353706.1-201ENST00000436728 494 ntBASIC1.33□□□□□ -2.2
TRIM4Q9C037 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRIM4Q9C037 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.33□□□□□ -2.2
TRIM4Q9C037 AC011005.2-201ENST00000487324 359 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms