Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 SRIP1-201ENST00000489235 288 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3□□□□□ -1.93
SDF4Q9BRK5 SNORA31.18-201ENST00000517043 134 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3□□□□□ -1.93
SDF4Q9BRK5 AC004486.1-201ENST00000546846 233 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3□□□□□ -1.93
SDF4Q9BRK5 AL391840.1-201ENST00000571144 367 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 MIR4775-201ENST00000581168 75 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 PIGPP4-201ENST00000584447 307 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 AL138889.2-201ENST00000603883 242 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 U6.42-201ENST00000618440 107 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 AC009161.2-201ENST00000624626 138 ntBASIC3□□□□□ -1.93
SDF4Q9BRK5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SDF4Q9BRK5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SDF4Q9BRK5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RNU6-371P-201ENST00000364283 108 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR1-2-201ENST00000384961 85 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RNA5SP111-201ENST00000411386 101 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RPL19P1-201ENST00000411635 428 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AL365338.1-201ENST00000422282 858 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MTND4P32-201ENST00000437189 1237 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 C1DP4-201ENST00000455429 424 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RNU7-182P-201ENST00000459009 62 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC104806.1-201ENST00000508720 308 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 BTF3P12-201ENST00000519620 469 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AP002963.1-201ENST00000530590 184 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 OR5AL2P-201ENST00000532185 920 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 OR5BN1P-201ENST00000532955 829 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AP005136.1-201ENST00000579765 429 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR3670-2-201ENST00000582974 65 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR3117-201ENST00000584034 78 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR3670-1-201ENST00000584160 65 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR3670-3-201ENST00000584855 65 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RSL24D1P11-201ENST00000591045 491 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 DEFB131E-202ENST00000602581 683 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AL356575.1-201ENST00000603008 283 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RN7SKP299-201ENST00000606679 301 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 MIR3670-4-201ENST00000612260 65 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AC011155.2-201ENST00000623202 216 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SDF4Q9BRK5 AL355596.1-201ENST00000565399 3996 ntBASIC2.99□□□□□ -1.93
SDF4Q9BRK5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 RNU6-456P-201ENST00000384493 107 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL139039.1-201ENST00000401900 692 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC004383.1-201ENST00000438135 289 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC104058.1-201ENST00000448028 297 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AP000705.1-201ENST00000454567 350 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 MTND4P2-201ENST00000507767 1203 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC008716.1-201ENST00000511084 513 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC079140.3-201ENST00000511111 550 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 RPL23AP94-201ENST00000512518 302 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 ACA59.2-201ENST00000517061 156 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 OR5AQ1P-201ENST00000527596 927 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC092325.1-201ENST00000566449 554 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC006362.1-201ENST00000567392 174 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL356280.1-201ENST00000603614 379 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AL670379.4-201ENST00000605279 254 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC098614.4-201ENST00000607601 462 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC245008.1-201ENST00000608123 476 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 AC091834.1-201ENST00000614543 472 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 SEPT14P19-203ENST00000633205 211 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 MIR7157-201ENST00000635801 60 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 U6.114-201ENST00000636407 96 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 MTND5P30-201ENST00000452896 1731 ntBASIC2.98□□□□□ -1.93
SDF4Q9BRK5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SDF4Q9BRK5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SDF4Q9BRK5 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
SDF4Q9BRK5 HSPA8P4-201ENST00000511877 1920 ntBASIC2.97□□□□□ -1.93
SDF4Q9BRK5 SNORA62.1-201ENST00000364287 154 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms