Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR51H2P-202ENST00000641424 3046 ntBASIC4.88□□□□□ -1.63
USB1Q9BQ65 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
USB1Q9BQ65 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.88□□□□□ -1.63
USB1Q9BQ65 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 RNY1P11-201ENST00000363759 113 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 Y_RNA.229-201ENST00000364347 113 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 Y_RNA.251-201ENST00000364551 99 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 RNA5SP515-201ENST00000364570 118 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 RNU6-855P-201ENST00000410395 104 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AL158823.1-201ENST00000418441 478 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AL356535.1-201ENST00000440335 398 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC000111.2-201ENST00000448200 210 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 HSPE1P13-201ENST00000451143 297 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 RN7SL629P-201ENST00000489622 285 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 MTND6P33-201ENST00000571794 183 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC025574.2-201ENST00000615621 514 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 SNORD98-201ENST00000636377 67 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 Z95331.1-201ENST00000623075 23112 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 AC022893.2-201ENST00000564832 3296 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 AL136164.4-201ENST00000625013 2135 ntBASIC4.87□□□□□ -1.63
USB1Q9BQ65 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
USB1Q9BQ65 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 RNU6-235P-201ENST00000362644 107 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 Y_RNA.341-201ENST00000365341 102 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 MIR493-201ENST00000385254 89 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 EI24P2-201ENST00000397776 1076 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 RNA5SP89-201ENST00000410300 108 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 GPS2P1-201ENST00000411761 986 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 NDUFS5P4-201ENST00000412983 318 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 AC099548.1-201ENST00000421443 426 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 RN7SL177P-201ENST00000476596 299 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 RN7SL30P-201ENST00000488416 306 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 IMMP1LP3-201ENST00000604197 224 ntBASIC4.86□□□□□ -1.63
USB1Q9BQ65 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.86□□□□□ -1.63
USB1Q9BQ65 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USB1Q9BQ65 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 AC126323.6-202ENST00000568092 3511 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 AC022336.2-201ENST00000568966 2538 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 SNORA25.7-201ENST00000364375 127 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 Y_RNA.456-201ENST00000384232 111 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 RNU6-622P-201ENST00000384272 103 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 SNORA75.5-201ENST00000391291 81 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 EIF4A1P3-201ENST00000411521 244 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 RNU7-141P-201ENST00000459304 62 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 RN7SL547P-201ENST00000490793 290 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 MIR4724-201ENST00000579485 89 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 MIR3914-2-201ENST00000637339 95 ntBASIC4.85□□□□□ -1.63
USB1Q9BQ65 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.85□□□□□ -1.63
USB1Q9BQ65 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USB1Q9BQ65 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms