Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.56□□□□□ -1.84
SMOQ99835 RPL23AP83-201ENST00000434984 473 ntBASIC3.56□□□□□ -1.84
SMOQ99835 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.56□□□□□ -1.84
SMOQ99835 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
SMOQ99835 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
SMOQ99835 AC096576.1-201ENST00000489014 359 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC139453.3-201ENST00000493276 369 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC026801.1-201ENST00000497178 464 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC116337.1-201ENST00000509680 687 ntBASIC3.56□□□□□ -1.84
SMOQ99835 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.56□□□□□ -1.84
SMOQ99835 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.56□□□□□ -1.84
SMOQ99835 AC093303.1-201ENST00000514549 295 ntBASIC3.56□□□□□ -1.84
SMOQ99835 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
SMOQ99835 AC100830.2-201ENST00000581636 240 ntBASIC3.56□□□□□ -1.84
SMOQ99835 ELOCP5-201ENST00000604924 333 ntBASIC3.56□□□□□ -1.84
SMOQ99835 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.56□□□□□ -1.84
SMOQ99835 ATP5A1P2-202ENST00000616464 443 ntBASIC3.56□□□□□ -1.84
SMOQ99835 RMST_4.1-201ENST00000616886 107 ntBASIC3.56□□□□□ -1.84
SMOQ99835 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.56□□□□□ -1.84
SMOQ99835 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.56□□□□□ -1.84
SMOQ99835 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SMOQ99835 AC007785.2-201ENST00000598627 1916 ntBASIC3.56□□□□□ -1.84
SMOQ99835 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.56□□□□□ -1.84
SMOQ99835 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
SMOQ99835 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.55□□□□□ -1.84
SMOQ99835 KPNA2P1-201ENST00000458289 1591 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.55□□□□□ -1.84
SMOQ99835 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMOQ99835 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMOQ99835 Y_RNA.128-201ENST00000363391 112 ntBASIC3.55□□□□□ -1.84
SMOQ99835 Y_RNA.216-201ENST00000364205 93 ntBASIC3.55□□□□□ -1.84
SMOQ99835 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SMOQ99835 RNU6-214P-201ENST00000384130 107 ntBASIC3.55□□□□□ -1.84
SMOQ99835 Y_RNA.473-201ENST00000384333 102 ntBASIC3.55□□□□□ -1.84
SMOQ99835 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
SMOQ99835 RNU2-71P-201ENST00000411395 189 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.55□□□□□ -1.84
SMOQ99835 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.55□□□□□ -1.84
SMOQ99835 ATG3P1-201ENST00000419507 911 ntBASIC3.55□□□□□ -1.84
SMOQ99835 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.55□□□□□ -1.84
SMOQ99835 AL590383.1-201ENST00000428602 75 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.55□□□□□ -1.84
SMOQ99835 HIGD1AP11-201ENST00000438361 280 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.55□□□□□ -1.84
SMOQ99835 RPL30P15-201ENST00000457129 321 ntBASIC3.55□□□□□ -1.84
SMOQ99835 Y_RNA.653-201ENST00000459091 95 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC011005.2-201ENST00000487324 359 ntBASIC3.55□□□□□ -1.84
SMOQ99835 HMGB1P30-201ENST00000492455 606 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SMOQ99835 MIR892C-201ENST00000516410 77 ntBASIC3.55□□□□□ -1.84
SMOQ99835 RNU6-1016P-201ENST00000516689 94 ntBASIC3.55□□□□□ -1.84
SMOQ99835 RNA5SP165-201ENST00000517142 115 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC025755.1-201ENST00000521306 278 ntBASIC3.55□□□□□ -1.84
SMOQ99835 ZNF192P1-203ENST00000565888 810 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.55□□□□□ -1.84
SMOQ99835 MIR3171-201ENST00000584270 74 ntBASIC3.55□□□□□ -1.84
SMOQ99835 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC136601.2-201ENST00000604356 474 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC123912.5-201ENST00000605470 343 ntBASIC3.55□□□□□ -1.84
SMOQ99835 AC244517.12-201ENST00000623581 663 ntBASIC3.55□□□□□ -1.84
SMOQ99835 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SMOQ99835 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SMOQ99835 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
SMOQ99835 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMOQ99835 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMOQ99835 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
SMOQ99835 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SMOQ99835 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
SMOQ99835 Y_RNA.187-201ENST00000363918 113 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RNU6-593P-201ENST00000364716 112 ntBASIC3.54□□□□□ -1.84
SMOQ99835 DEFB109C-201ENST00000382575 264 ntBASIC3.54□□□□□ -1.84
SMOQ99835 DEFB109B-201ENST00000382656 264 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RNU6-310P-201ENST00000384655 107 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RPL5P18-201ENST00000406671 891 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RNA5SP129-201ENST00000410276 118 ntBASIC3.54□□□□□ -1.84
SMOQ99835 Y_RNA.646-201ENST00000410980 101 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.54□□□□□ -1.84
SMOQ99835 Z82205.1-201ENST00000428456 297 ntBASIC3.54□□□□□ -1.84
SMOQ99835 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.54□□□□□ -1.84
SMOQ99835 Z82210.1-201ENST00000440037 231 ntBASIC3.54□□□□□ -1.84
SMOQ99835 ELOCP24-201ENST00000456370 334 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RNU7-187P-201ENST00000458985 68 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RPL23AP62-201ENST00000463396 453 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AL135752.1-201ENST00000479477 471 ntBASIC3.54□□□□□ -1.84
SMOQ99835 MTCYBP40-201ENST00000509390 1135 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC096745.1-201ENST00000509945 370 ntBASIC3.54□□□□□ -1.84
SMOQ99835 RNA5SP291-201ENST00000517222 105 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC104576.1-201ENST00000524225 88 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
SMOQ99835 ELOCP31-201ENST00000540463 467 ntBASIC3.54□□□□□ -1.84
SMOQ99835 MIR5690-201ENST00000583739 73 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC078795.3-201ENST00000602913 472 ntBASIC3.54□□□□□ -1.84
SMOQ99835 SNRPGP17-201ENST00000603780 214 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC004805.2-201ENST00000605382 482 ntBASIC3.54□□□□□ -1.84
SMOQ99835 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
SMOQ99835 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms