Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 RNU1-107P-201ENST00000516617 154 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC104576.1-201ENST00000524225 88 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.33□□□□□ -1.88
SNX18Q96RF0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC100830.2-201ENST00000581636 240 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 ELOCP5-201ENST00000604924 333 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC009229.3-201ENST00000608056 282 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC005344.1-201ENST00000613391 459 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC098657.3-201ENST00000620434 263 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AC039056.2-201ENST00000622261 511 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 AL672296.1-201ENST00000427780 2158 ntBASIC3.33□□□□□ -1.88
SNX18Q96RF0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SNX18Q96RF0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
SNX18Q96RF0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 SNORD62.1-201ENST00000362541 86 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 SNORD3E-201ENST00000362899 217 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 SNORD73A-201ENST00000386062 65 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 SETP5-201ENST00000437270 562 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 AL358232.1-201ENST00000448030 501 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 RPL7P42-201ENST00000481005 679 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 RPS4XP13-201ENST00000483219 789 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC026782.1-201ENST00000512952 449 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 RNU6-1045P-201ENST00000516321 107 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 RNU6-579P-201ENST00000516879 102 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 Y_RNA.708-201ENST00000516950 96 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 RNA5SP165-201ENST00000517142 115 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC006504.6-201ENST00000590142 199 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 CYP2C61P-201ENST00000604072 290 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AP000654.2-201ENST00000605633 586 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC019193.3-201ENST00000609144 554 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC133104.2-201ENST00000615272 193 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 PISRT1.1-201ENST00000616930 107 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 FP236240.3-201ENST00000623061 327 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 AL732372.2-225ENST00000642124 456 ntBASIC3.32□□□□□ -1.88
SNX18Q96RF0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.32□□□□□ -1.88
SNX18Q96RF0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX18Q96RF0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX18Q96RF0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 RNA5SP124-201ENST00000362739 110 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 SNORA22B-201ENST00000383876 138 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 HMGB1P12-201ENST00000438594 598 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 RPS4XP2-201ENST00000458402 793 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 RPL30P5-201ENST00000494923 336 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 MIR892C-201ENST00000516410 77 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 SNRPGP18-201ENST00000553000 214 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 OR1M4P-201ENST00000589199 287 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC024220.1-201ENST00000603675 484 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC136601.2-201ENST00000604356 474 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC016925.2-201ENST00000605108 242 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC018462.2-201ENST00000605375 395 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC004805.2-201ENST00000605382 482 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AL162730.1-201ENST00000605734 292 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AL161423.1-201ENST00000613700 262 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AL121772.2-201ENST00000614331 297 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC092608.2-201ENST00000624427 218 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AC048347.1-201ENST00000624621 427 ntBASIC3.31□□□□□ -1.88
SNX18Q96RF0 AP000553.6-201ENST00000641242 118 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms