Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL121839.1-201ENST00000556233 1185 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL162730.1-201ENST00000605734 292 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AC093788.1-201ENST00000609356 927 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.04□□□□□ -2.4
CFAP54Q96N23 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL512506.2-201ENST00000624472 458 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 Y_RNA.203-201ENST00000364106 102 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 RNU1-119P-201ENST00000391122 165 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.04□□□□□ -2.4
CFAP54Q96N23 ISCA1P1-201ENST00000426679 387 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL133373.1-201ENST00000497098 94 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 SNORA76.2-201ENST00000517095 137 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AC008562.1-201ENST00000521763 330 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AL713866.2-201ENST00000603579 219 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 AP000811.1-201ENST00000603803 651 ntBASIC0.04□□□□□ -2.4
CFAP54Q96N23 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CFAP54Q96N23 U3.13-201ENST00000364804 214 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.03□□□□□ -2.4
CFAP54Q96N23 AL645638.1-201ENST00000440519 361 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 snoU13.21-201ENST00000459368 105 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 RPL21P103-201ENST00000479921 488 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.03□□□□□ -2.4
CFAP54Q96N23 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.03□□□□□ -2.4
CFAP54Q96N23 RNY4P6-201ENST00000363667 96 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 RNA5SP212-201ENST00000391223 107 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 AL049830.1-201ENST00000468034 425 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.03□□□□□ -2.4
CFAP54Q96N23 ACA64.5-201ENST00000516207 127 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 RNU6-1073P-201ENST00000517182 106 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 AL021997.1-201ENST00000605757 193 ntBASIC0.03□□□□□ -2.4
CFAP54Q96N23 MIR1295A-201ENST00000408463 79 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 RNU6-272P-201ENST00000411028 104 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 EIF1P1-201ENST00000421436 341 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC096920.1-201ENST00000423991 241 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC092047.1-201ENST00000424997 240 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC025449.1-201ENST00000603896 529 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 AP1S2P1-201ENST00000457344 379 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC104108.1-201ENST00000509930 412 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 Y_RNA.67-201ENST00000362870 100 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 RNA5SP105-201ENST00000391123 113 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 AL669831.1-202ENST00000428504 417 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 GTF2IP13-201ENST00000438487 386 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 COX6CP6-201ENST00000490840 228 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.02□□□□□ -2.41
CFAP54Q96N23 MTND2P13-201ENST00000577438 1039 ntBASIC0.02□□□□□ -2.41
CFAP54Q96N23 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.01□□□□□ -2.41
CFAP54Q96N23 RNA5SP451-201ENST00000410588 110 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC244505.3-201ENST00000454598 187 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC010627.1-201ENST00000503819 1294 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC147055.4-201ENST00000504399 745 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC011260.1-201ENST00000578420 472 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 SNORD39.2-201ENST00000579995 76 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.01□□□□□ -2.41
CFAP54Q96N23 RNU1-105P-201ENST00000363470 161 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 RNU6-46P-201ENST00000383860 107 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.01□□□□□ -2.41
CFAP54Q96N23 AL513343.1-201ENST00000451818 792 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 OR52A4P-202ENST00000481634 799 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 HMGB1P36-201ENST00000487709 576 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC002350.1-201ENST00000490759 375 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.01□□□□□ -2.41
CFAP54Q96N23 SCARNA8-201ENST00000515924 131 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC067838.1-201ENST00000606064 577 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 AC073349.3-201ENST00000617616 186 ntBASIC0.01□□□□□ -2.41
CFAP54Q96N23 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
CFAP54Q96N23 Y_RNA.28-201ENST00000362554 111 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 RPS26P42-201ENST00000413485 326 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0□□□□□ -2.41
CFAP54Q96N23 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0□□□□□ -2.41
CFAP54Q96N23 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0□□□□□ -2.41
CFAP54Q96N23 AC093677.1-201ENST00000514414 678 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 AC105224.1-201ENST00000587055 421 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 RNU6-968P-201ENST00000384076 107 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 Y_RNA.551-201ENST00000384661 102 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 MIR92A2-201ENST00000385299 75 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 Z75746.1-201ENST00000440243 2080 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0□□□□□ -2.41
CFAP54Q96N23 AP003122.4-201ENST00000530980 758 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0□□□□□ -2.41
CFAP54Q96N23 AC015726.3-201ENST00000624501 418 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 AC092192.1-201ENST00000633154 1018 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 AC099654.5-201ENST00000636479 350 ntBASIC0□□□□□ -2.41
CFAP54Q96N23 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0□□□□□ -2.41
CFAP54Q96N23 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC-0□□□□□ -2.41
CFAP54Q96N23 HMGB1P38-201ENST00000490557 577 ntBASIC-0□□□□□ -2.41
CFAP54Q96N23 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0□□□□□ -2.41
CFAP54Q96N23 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC-0.01□□□□□ -2.41
CFAP54Q96N23 SNORD114-28-201ENST00000363610 72 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 SNORA25-201ENST00000384384 134 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms