Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.480-201ENST00000384364 102 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-1035P-201ENST00000384477 107 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AL122016.1-201ENST00000403365 367 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AL356432.1-201ENST00000405809 419 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RNA5SP44-201ENST00000410446 133 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-607P-201ENST00000411283 108 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RPL7P10-201ENST00000417407 739 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AL353621.1-201ENST00000418219 243 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC007560.1-201ENST00000426912 237 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 MYL8P-204ENST00000431574 518 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC117503.1-201ENST00000472241 394 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 SNORA31.19-201ENST00000517079 126 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RAB11AP2-201ENST00000545905 639 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 MIR3942-201ENST00000585264 109 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC243960.4-201ENST00000600532 288 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 NUTF2P8-201ENST00000604593 363 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC073657.2-201ENST00000605661 303 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 AC012314.7-201ENST00000619693 93 ntBASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDK5RAP3Q96JB5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AL049781.1-201ENST00000623195 3585 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-797P-201ENST00000363101 109 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-254P-201ENST00000363377 107 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-1013P-201ENST00000384180 107 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-198P-201ENST00000384258 104 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 MIR183-201ENST00000384958 110 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 MIR450B-201ENST00000401182 78 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 YME1L1P1-201ENST00000429435 297 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 PRSS3P4-201ENST00000453323 162 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AL583843.1-201ENST00000456070 346 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RPS26P21-201ENST00000475397 348 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RPL21P13-201ENST00000488305 481 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU1-86P-201ENST00000516108 154 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-864P-201ENST00000516256 108 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 MIR892C-201ENST00000516410 77 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU1-107P-201ENST00000516617 154 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-572P-201ENST00000516724 80 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 CYCSP27-201ENST00000527643 293 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 DNAJC8P1-201ENST00000554535 372 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 LRRC37A5P-203ENST00000580181 585 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 MIR5692C1-201ENST00000585309 91 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC007938.3-201ENST00000604965 623 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 U6.105-201ENST00000637379 88 ntBASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDK5RAP3Q96JB5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 GABRG2-229ENST00000641017 3628 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-799P-201ENST00000363567 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 MT-TD-201ENST00000387419 68 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 CYCSP33-201ENST00000414485 327 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC097713.2-201ENST00000430199 356 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 MTND3P23-201ENST00000431980 347 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC115115.1-201ENST00000449927 248 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC008155.2-201ENST00000464337 397 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 RPL7P43-201ENST00000478876 753 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 MTND3P22-201ENST00000510932 243 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-1069P-201ENST00000516612 133 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 RNU6-323P-201ENST00000521915 107 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 RMST_7.1-201ENST00000621935 268 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AL133216.2-202ENST00000634512 349 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 TPTEP1-208ENST00000636884 213 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 U6.99-201ENST00000637524 83 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 AC103988.1-201ENST00000566382 2177 ntBASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK5RAP3Q96JB5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CDK5RAP3Q96JB5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.65□□□□□ -1.82
CDK5RAP3Q96JB5 Y_RNA.184-201ENST00000363884 108 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-884P-201ENST00000363889 107 ntBASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.529-201ENST00000384586 119 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms