Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SKA1Q96BD8 SNORA38-201ENST00000363946 132 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 RNU6-72P-201ENST00000384285 79 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 CIR1P3-201ENST00000405137 479 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL592148.1-201ENST00000413568 445 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL353621.1-201ENST00000418219 243 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC097463.2-201ENST00000421074 142 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL360271.2-201ENST00000447710 161 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 RNU7-26P-201ENST00000458980 63 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC090096.1-201ENST00000489168 390 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC018437.1-201ENST00000492214 406 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 SUB1P2-201ENST00000556401 297 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 AC025678.1-201ENST00000567861 338 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 MIR4775-201ENST00000581168 75 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 MIR3529-201ENST00000637713 78 ntBASIC3.04□□□□□ -1.92
SKA1Q96BD8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SKA1Q96BD8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
SKA1Q96BD8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SKA1Q96BD8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 SNORA75-201ENST00000384158 137 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 MTCO2P34-201ENST00000421994 607 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 MTCO3P30-201ENST00000426425 670 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AL358934.1-201ENST00000432346 324 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 AL596276.1-201ENST00000434465 418 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 MTCO2P16-201ENST00000436962 677 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 MTND4P32-201ENST00000437189 1237 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 RPS29P6-201ENST00000438196 145 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 snoU109.2-201ENST00000459316 135 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 MED28P2-201ENST00000475771 317 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC011005.2-201ENST00000487324 359 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 RN7SL633P-201ENST00000488974 297 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 RPL23AP94-201ENST00000512518 302 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 RN7SKP298-201ENST00000515950 94 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 MIR5571-201ENST00000577998 113 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC073648.5-201ENST00000603502 305 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC006023.1-201ENST00000603944 259 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC008945.2-201ENST00000606056 604 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC098614.4-201ENST00000607601 462 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 MIR6733-201ENST00000635723 61 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 AC090582.1-201ENST00000636321 199 ntBASIC3.03□□□□□ -1.92
SKA1Q96BD8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.03□□□□□ -1.92
SKA1Q96BD8 RNU6-550P-201ENST00000391057 101 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 RAP1BP3-201ENST00000407180 549 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.02□□□□□ -1.93
SKA1Q96BD8 MTCO1P19-201ENST00000443487 500 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC132479.1-201ENST00000449160 144 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC104136.1-201ENST00000512969 394 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 MIR892C-201ENST00000516410 77 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 RNA5SP367-201ENST00000516557 118 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC006362.1-201ENST00000567392 174 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC138761.3-201ENST00000579993 334 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 RPL12P50-201ENST00000603116 116 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC100793.4-201ENST00000613683 429 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC091834.1-201ENST00000614543 472 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC010378.1-201ENST00000619270 362 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SKA1Q96BD8 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
SKA1Q96BD8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
SKA1Q96BD8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
SKA1Q96BD8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SKA1Q96BD8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SKA1Q96BD8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
SKA1Q96BD8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SKA1Q96BD8 OR4G2P-201ENST00000328113 903 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNU6-1029P-201ENST00000384109 107 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 SNORD116-2-201ENST00000384274 95 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNU6-1072P-201ENST00000384703 107 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 SNORD116-6-201ENST00000384711 96 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNU6-606P-201ENST00000384721 111 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNU6-443P-201ENST00000384780 107 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNA5SP274-201ENST00000410484 108 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RNU4-46P-201ENST00000410818 138 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms